Pairwise Alignments

Query, 409 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 381 a.a., site-specific recombinase, phage integrase family from Bacteroides ovatus ATCC 8483

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 9/237 (3%)

Query: 161 QLNEQFIRDYQDFILLE---KGYAVD--TLRGYLAILKKICRIAYKEGHSEKYHFCHFKL 215
           Q++  F R Y  ++L E   KG  +   TL  Y   L      A ++   +   F   + 
Sbjct: 134 QIDGDFCRGYITYLLTEYHPKGKDISNYTLHNYYRALNGALNSAVRKKKMKANPFNELEK 193

Query: 216 PKQKETTPKALSRENFEKLRDL-EIPEKRRSHVITRDLFLFACYTGTAYADAVSITRKNL 274
            ++        S    E+++ L + P     + I +  +LF+C+ G   +D + +  K++
Sbjct: 194 SEKIRKPESMRSYMTIEEVQALIDTPMPHEEYEIVKCAYLFSCFCGLRISDIIKLKWKDV 253

Query: 275 FRDDEGSLWLKYQRKKTDYLGRVKLLPEAVALI-EKYRDDTRETLFPPQDYHTLRANMKS 333
           F D  G   L    KKT     + L PEA+  + E+    + + +F     +T+R  +K 
Sbjct: 254 FVD-RGQYRLAVSMKKTKEPIYLPLSPEALKWMPERGGKSSEDNVFDLPSANTIRMQLKP 312

Query: 334 LRLMAGLSQDLVYHMGRHSFASLVTLEEGVPIETICKMLGHSNIKTTQIYARVTPKK 390
               AG+S+   YH  RH+FA+++ L  G  + T+ K+LGH+++K TQ+YA++  KK
Sbjct: 313 WAKAAGISKRFSYHTSRHTFATMM-LTLGADLYTVSKLLGHADVKMTQVYAKIINKK 368