Pairwise Alignments

Query, 409 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 443 a.a., site-specific recombinase, phage integrase family from Bacteroides ovatus ATCC 8483

 Score = 90.9 bits (224), Expect = 7e-23
 Identities = 96/400 (24%), Positives = 178/400 (44%), Gaps = 39/400 (9%)

Query: 8   VLLYLKKSEPDKTGKAPIMGRITLNRTMAQFSCKLSCTPGLWNARESRL-NGK-----SR 61
           V L L KS     G  P++ ++  NR              +++  E ++ NG      + 
Sbjct: 42  VKLMLNKSRILNNGSYPLVFQVIHNRRKKLLYTGYRVKEEVFDVSEGKIKNGAGSAFTAT 101

Query: 62  EAVETNEKIERLLLAVHSAFNSLMERKRDFDAAAVRDMFQGNA-GMQMTLLKLLDRHNGE 120
           E V+ N  + +L   + +    L   + +F    V D+   NA G +     LL   N +
Sbjct: 102 EVVKMNRGLRKLRNRIDTRIRQLERTREEF---TVEDILAQNAFGTREPQFYLLRYINAQ 158

Query: 121 MKARVGVDRAPTTLSTYLFTYRTLSEFIKAKFKVPDLVFGQLNEQFIRDYQDFILLEKGY 180
           ++ +  + +     + Y  T  +L++FI      PD+   +++  F+  Y DF L   G 
Sbjct: 159 IERKRELKKVGMA-AAYKSTRSSLAKFISR----PDVRMSEVDSAFVGRYGDF-LYSNGA 212

Query: 181 AVDTLRGYLAILKKICRIAYKEGHSEKYHFCHFKLP-KQKETTPKALSRENFEKLRDLEI 239
           + +T+  YL  L+ +   A  +G+  +  +   K   +  +T  +ALSR + + L DL +
Sbjct: 213 SGNTVSYYLRNLRSLYNQAVADGYHPRGEYPFAKAQTRPAKTVKRALSRTDMQNLADLNL 272

Query: 240 PEKRRSHVITRDLFLFACYT-GTAYADAVSITRKNLFRDDEGSLWLKYQRKKTDYLGRVK 298
            E        RDL+LF+ Y  G A+ D V + + ++         L Y R K+  L R+ 
Sbjct: 273 -ENEPELEFARDLYLFSFYAQGMAFVDIVLLRKADICNGV-----LAYSRHKSKQLIRIA 326

Query: 299 LLPEAVALIEKYRDDTRETLFP--PQDYHT-----------LRANMKSLRLMAGLSQDLV 345
           + P+   L++KY+    E LFP    +Y +           +  ++K + + A +   L 
Sbjct: 327 VTPQMQGLMDKYKTG-NEYLFPIISGEYASGYKQYRLALGRINRHLKKIAVAADIKVPLT 385

Query: 346 YHMGRHSFASLVTLEEGVPIETICKMLGHSNIKTTQIYAR 385
            +  RH++A+L   + G PI  I   LGH++ + T++Y +
Sbjct: 386 TYTARHTWATLAR-DYGAPISVISAGLGHTSEEMTRVYLK 424