Pairwise Alignments

Query, 255 a.a., putative metal-dependent hydrolase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 362 a.a., Outer membrane protein romA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 44.3 bits (103), Expect = 4e-09
 Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 37/214 (17%)

Query: 56  HASLLIEYAGKKFFVDPV-SDYADFTQQ----------------PKADYILITHEHHDHF 98
           H+S L++  G+ + +DPV S+ A   Q                 P  D ++++H+H+DH 
Sbjct: 103 HSSHLLKLQGRYWLIDPVFSERASPVQWLGPKRFHAPPLSLDELPPIDGLILSHDHYDHL 162

Query: 99  DTKAIAAIETPDTKII----ANPNCQKMLDKGQAMKNGDILQITPE--IKLEAVPAYNTT 152
           D   I A+     +           Q M    Q ++  D  Q T    ++L A PA++ +
Sbjct: 163 DQATIEALRERVQRYFVPLGVRERLQGMGVDPQRVQEFDWWQETRHAGVQLTATPAHHFS 222

Query: 153 PGRDKFHPKGR-DNGYILTVGGTRIYIAGDTEDIPEMKQIKN----IDIAFLPVNQPYT- 206
            GR  +         + +  G  RI+ +GD+      K I      IDIA L  N  Y  
Sbjct: 223 -GRTLWDRNSTLWASWFIQSGQERIFFSGDSGYFAGFKAIAERLGPIDIALLE-NGAYDS 280

Query: 207 ------MTPEQAIQSAKTIQPHILYPYHYGDTNI 234
                 M+PE+ +Q+ K ++   LY  H    N+
Sbjct: 281 YWPSAHMSPEETVQAFKDLRAKQLYLVHNSTFNL 314