Pairwise Alignments

Query, 285 a.a., transcriptional regulator, AraC-type (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 288 a.a., AraC family transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score =  151 bits (381), Expect = 2e-41
 Identities = 92/283 (32%), Positives = 148/283 (52%), Gaps = 8/283 (2%)

Query: 8   KEEYQKCVNVVVEYINQHLGEDIDLKSLARISNFSPFYFHRIMKAFLGEPIGTFIVRTRT 67
           +  Y   ++ V+++I  HL E +D+  LA I+  SP+++HRI +A  GE + T + R R 
Sbjct: 7   RARYAARLSRVLDHIYDHLDEPLDIDRLAGIACLSPYHWHRIYQAMYGETVATTVRRLRL 66

Query: 68  EAAARLLRYSDIPIADIAYRIGYSSPSSLSKVFRQFYGISPLEYRNNKNFVIMKPAIIRP 127
             AA  L    + IA+IA R GYSS  S ++ F   +G+ P +YR +   +  +P++   
Sbjct: 67  HRAAGFLANGSMSIAEIAERSGYSSLQSFTRTFSAVFGMPPAQYRKSGTHIRFRPSLADS 126

Query: 128 ---DLELKS-EIKSIPARNVIYIRLSGDYKLNDYGGTWGRLWQFIKEQKLPMGDFSPLCI 183
              ++ ++   I+ I   +V+ +   G Y     G  +  L  ++  + L  G+   + I
Sbjct: 127 GGNEMTMRDVVIRDIDGFDVLTVDHVGPYM--QIGKAFDTLMGWLASRGLLSGEMRMIGI 184

Query: 184 YHDDPKVTPAEKLRTDVCMVMPVQVAPKGD--VGFKTLPAGRYAIFLYKGTYDNLQAVYD 241
           Y+DDP      +LR+   + +P  V   GD  V   ++  GRYA+  +KG Y ++ A Y 
Sbjct: 185 YYDDPTAVAENELRSKAGVWLPRAVDVSGDALVSVTSIMGGRYAVLRHKGPYADMAAAYQ 244

Query: 242 TIYGKCLPEMECTLRDEPSAERYLNNPCETAPEELLTEIYIPV 284
            +YG+ L   E    D P  E YLNNP ETAP  LLT+I +PV
Sbjct: 245 WLYGEWLVNSEHEAADAPVFEEYLNNPKETAPANLLTDICLPV 287