Pairwise Alignments

Query, 285 a.a., transcriptional regulator, AraC-type (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 291 a.a., AraC family transcriptional regulator from Pectobacterium carotovorum WPP14

 Score =  120 bits (300), Expect = 5e-32
 Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 20/291 (6%)

Query: 9   EEYQKCVNVVVEYINQHLGEDIDLKSLARISNFSPFYFHRIMKAFLGEPIGTFIVRTRTE 68
           + Y +    V +YI+ HL + + L+ L+ +++FSPF+FHR   ++ G P G +I   R +
Sbjct: 7   DSYARRFKQVFDYIDCHLDDTLLLEKLSEVAHFSPFHFHRQFCSYCGMPPGRYIQMMRLK 66

Query: 69  AAARLLRYSDIP-IADIAYRIGYSSPSSLSKVFRQFYGISPLEYRNNKNFV-----IMKP 122
            A+  L ++ +  I DIA+  G+    S S+ FRQ + +SP ++R    +V     I +P
Sbjct: 67  RASYRLAFNPLEKITDIAFDAGFQHSESFSRAFRQMFDLSPTQFRQQPPWVDWYKRISEP 126

Query: 123 AIIRPDLELKSEIKSI--PARNVIYIRLSGDYKLNDYGGTWGRLWQFIKEQKL----PMG 176
              R  + ++ ++K I  PA +V  +   G  +L +         +FI+ +K     P+ 
Sbjct: 127 YKARRQI-MQGQVKIINFPATSVAMLTHYGQAELINETAA-----RFIEWRKTTGYSPVA 180

Query: 177 DFSPLCIYHDDPKVTPAEKLRTDVCMVMPVQVAPKGDVGF--KTLPAGRYAIFLYKGTYD 234
                 I   DP +TP ++    +C  +   ++     G     +PAGR A+  ++G++D
Sbjct: 181 SSQTYGIAPHDPTLTPPDEFEFHICGTVKSPISEDNRFGVINSVIPAGRCAVLRHQGSHD 240

Query: 235 NLQAVYDTIYGKCLPEMECTLRDEPSAERYLNNPCETAPEELLTEIYIPVE 285
            L  +  T+Y   LPE    LRD P    Y N   E A  ELLT+IY+P++
Sbjct: 241 VLPELAKTLYRDWLPESGEELRDFPLFFHYHNFVHEVAEHELLTDIYLPLK 291