Pairwise Alignments

Query, 440 a.a., BexA, putative cation effux pump (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 467 a.a., putative efflux protein, MATE family from Kangiella aquimarina DSM 16071

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 96/457 (21%), Positives = 198/457 (43%), Gaps = 57/457 (12%)

Query: 11  INFPVMMSILMEQLINITDAVFLGHVGEIELGASALAGIYYLAIYMLGFGFSIGLQVMIA 70
           I  P +++ L +  + + D +  G+     L A       ++ I+ L  G  + +  M+A
Sbjct: 30  IAIPAILAQLAQMSLGVIDTLMAGNYSSNALAAVGTGFNAFMIIFSLFMGLMMAINPMVA 89

Query: 71  RRNGEQHYKETGRTFFQGLYFLMVMAIMLCLLIHLVSPFILQQLITSDEIYQAVIRYLNW 130
             NG+   +  G+TF  G++  ++  I+  +L+  V PF L  L   + I +    YL  
Sbjct: 90  HFNGQGKMESIGKTFQMGMFLAIIFGIITFILLRNVDPF-LTLLGVEEAIVETTGGYLKA 148

Query: 131 RSFGLLFSFPFLAFRAFLVGVTNTKLLSGAALTAVCINIPFNYLLIF----KLDMGISGA 186
            S+G +F+F F+A R+   G+ +TK++   +   +  N+ FN   I+       MG  G 
Sbjct: 149 LSWGCVFAFLFIALRSGNEGLFSTKIIMICSFMVIPFNLLFNTWFIYGGFGVPAMGAIGV 208

Query: 187 AMASSIAEFGAFLILLLYMCKTVDKKKYGLSAVYDGRLLMKLLQLSVWSMLHAFIS---- 242
             A+S+     FL LL +  +         +  +    + K ++L  W ++  F S    
Sbjct: 209 GYATSVVWTLLFLFLLFFTWR---------NPSFASLNIFKKVRLPTWQLIKEFFSIGTP 259

Query: 243 --------VAPWFLFFVAIEHLGKTELAISNITRSVSTLFFVIVNSFASTTGSLVSNLIG 294
                   V+ + +  + +   G        I  +++T+ F++    +      ++  +G
Sbjct: 260 MSLGLLMEVSMFGMIGILVARYGVDLTGAHQIAMNIATVAFMVPWGLSIA----ITARVG 315

Query: 295 GGQGKELFPVCRKVLRLGYV-VGLPLILTA------LWGNQWIIGFYTNNDYLVKLAFWP 347
              G++ +   R++   G+  +G  L   A      L+    ++G YT+N  +++++   
Sbjct: 316 YWMGRQDY---RQMRLSGFCGIGASLFFQAVSVTIMLFFRYELVGVYTDNQAIIEIS--- 369

Query: 348 FIVMLLNYVFALPGYVYIN---AVTGTGKTRLAFVFQLVT--ILIYLIYLYLLSECFHAS 402
             ++ L  +F     + +N   A+ G   T++  V+  +   ++ + I +YL     H  
Sbjct: 370 ASLIFLAAIFQFSDGLQVNSAGALRGMKDTKIPTVYMAIAYWLIGFPIGIYLAD---HMD 426

Query: 403 LTVYMTAEYLFVIL-LGIQSILYLKR---KSKQNMYF 435
           L V     ++ +I  L + +IL L R   +SKQ + F
Sbjct: 427 LKV--QGFWIGIIFGLTVAAILLLGRFIHRSKQTIAF 461



 Score = 32.0 bits (71), Expect = 4e-05
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 5/115 (4%)

Query: 6   KQIWLINFPVMMSILMEQLINITDAVFLGHVGEIELGASALAGIYYLAIYMLGFGFSIGL 65
           K+ + I  P+ + +LME  +     + +   G    GA  +A       +M+ +G SI +
Sbjct: 251 KEFFSIGTPMSLGLLMEVSMFGMIGILVARYGVDLTGAHQIAMNIATVAFMVPWGLSIAI 310

Query: 66  QVMIARRNGEQHYKETGRTFFQG----LYFLMV-MAIMLCLLIHLVSPFILQQLI 115
              +    G Q Y++   + F G    L+F  V + IML     LV  +   Q I
Sbjct: 311 TARVGYWMGRQDYRQMRLSGFCGIGASLFFQAVSVTIMLFFRYELVGVYTDNQAI 365