Pairwise Alignments

Query, 200 a.a., 3-isopropylmalate dehydratase small subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 201 a.a., 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  157 bits (397), Expect = 1e-43
 Identities = 88/196 (44%), Positives = 123/196 (62%), Gaps = 7/196 (3%)

Query: 5   KFNIITSTCVPLPLENVDTDQIIPARFLKATTREEKFFGDNLFRDWRYNADGSL--NKDF 62
           KF   T   VPL   NVDTD IIP +FL+  TR    FG +LF DWR+  +     N +F
Sbjct: 4   KFTQHTGLVVPLDAANVDTDAIIPKQFLQKVTRTG--FGAHLFNDWRFLDEKGQQPNPEF 61

Query: 63  VLNDPTYSG-QILVAGKNFGSGSSREHAAWAIAGYGFRVVVSSFFADIHKNNELNNFVLP 121
           VLN P Y G  IL+A +NFG GSSREHA WA+  YGF+VV++  FADI   N  NN +LP
Sbjct: 62  VLNFPEYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLP 121

Query: 122 VVVTEGFLQELFDSIFADPKMEVEVNLPEQTITNKATGKSEHFEINAYKKLCLMNGLDDI 181
           V +++  + ELF  + A+P ++ EV+L  Q +  KA  K+  F+I+ +++ C++NGLD I
Sbjct: 122 VTLSDAQVDELFALVKANPGIKFEVDLEAQVV--KAGDKTYSFKIDDFRRHCMLNGLDSI 179

Query: 182 DFLLSNKNKIEEWENK 197
              L +++ I  +ENK
Sbjct: 180 GLTLQHEDAIAAYENK 195