Pairwise Alignments

Query, 272 a.a., TPR-repeat-containing protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 468 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 63.9 bits (154), Expect = 6e-15
 Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 57  NAMLFSNLGLVQRRLGEYDKALESYSFALNFAPLAVPILLDRAAINLEMGNTDRAYTDYC 116
           +A  + NLG+V  RLG Y++A+ +Y +AL           +     +     ++A   Y 
Sbjct: 202 SAEAWYNLGVVYNRLGRYEEAINAYDYALIIDDSFASAYFNMGNALMNTQQYEKATEAYL 261

Query: 117 QVLDEDKQNKEALLMRAYIYVLRRDYPAARIDYNRLLEIDPQSYSGRLGLATLEQKEGKF 176
             ++ +  N E     A  +        A   + +  ++DP+      GL     K+ KF
Sbjct: 262 NTINSEGANSENCCYLAAAFEKLDQMDKAFTYFKKSAKLDPEYDDAWFGLGMCMLKKDKF 321

Query: 177 KEALEILNKMITATPEDATLYIARADVEREMKHEDLALVDLEEAIRLNPSSADAYLLRGN 236
            EA+    K +  +  +A  ++  AD E  + +   +    EEAI L P   + Y+    
Sbjct: 322 FEAIHYFKKALKLSSVNANYWVGLADAEYHLGNLQASSEAYEEAINLEPGLMETYVNLSI 381

Query: 237 IYLTQKKKALAKMDFEKAISL 257
           IY  Q +       FE+AI +
Sbjct: 382 IYFDQNR-------FEEAIDV 395



 Score = 43.5 bits (101), Expect = 8e-09
 Identities = 46/206 (22%), Positives = 78/206 (37%)

Query: 52  PKNAKNAMLFSNLGLVQRRLGEYDKALESYSFALNFAPLAVPILLDRAAINLEMGNTDRA 111
           P     A ++ +LG   R     +KA+  Y  A+         L   A I  E G+ D  
Sbjct: 129 PMAEDKAEIYYSLGNFYRAENNTEKAIFHYKNAVKLKINHEDALFQLAMITEEEGSFDEI 188

Query: 112 YTDYCQVLDEDKQNKEALLMRAYIYVLRRDYPAARIDYNRLLEIDPQSYSGRLGLATLEQ 171
              Y + +D+D  + EA      +Y     Y  A   Y+  L ID    S    +     
Sbjct: 189 LQFYQEFIDQDPYSAEAWYNLGVVYNRLGRYEEAINAYDYALIIDDSFASAYFNMGNALM 248

Query: 172 KEGKFKEALEILNKMITATPEDATLYIARADVEREMKHEDLALVDLEEAIRLNPSSADAY 231
              ++++A E     I +   ++      A    ++   D A    +++ +L+P   DA+
Sbjct: 249 NTQQYEKATEAYLNTINSEGANSENCCYLAAAFEKLDQMDKAFTYFKKSAKLDPEYDDAW 308

Query: 232 LLRGNIYLTQKKKALAKMDFEKAISL 257
              G   L + K   A   F+KA+ L
Sbjct: 309 FGLGMCMLKKDKFFEAIHYFKKALKL 334



 Score = 33.5 bits (75), Expect = 9e-06
 Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 37/170 (21%)

Query: 28  AIEYIEMDSLSKAEELLLQALKLEPKNAKNAMLFSNLGLVQRRLGEYDKALESYSFALNF 87
           A  + ++D + KA     ++ KL+P+       +  LG+   +  ++ +A+  +  AL  
Sbjct: 278 AAAFEKLDQMDKAFTYFKKSAKLDPEYDD---AWFGLGMCMLKKDKFFEAIHYFKKALKL 334

Query: 88  APLAVPILLDRAAINLEMGNTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRRDYPAARI 147
           + +     +  A     +GN   +   Y     E+  N E  LM  Y+            
Sbjct: 335 SSVNANYWVGLADAEYHLGNLQASSEAY-----EEAINLEPGLMETYV------------ 377

Query: 148 DYNRLLEIDPQSYSGRLGLATLEQKEGKFKEALEILNKMITATPEDATLY 197
                             L+ +   + +F+EA+++L + I   PEDA LY
Sbjct: 378 -----------------NLSIIYFDQNRFEEAIDVLKEGIDELPEDAELY 410



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 4/108 (3%)

Query: 32  IEMDSLSKAEELLLQALKLEPKNAKNAMLFSNLGLVQRRLGEYDKALESYSFALNFAPLA 91
           ++ D   +A     +ALKL   ++ NA  +  L   +  LG    + E+Y  A+N  P  
Sbjct: 316 LKKDKFFEAIHYFKKALKL---SSVNANYWVGLADAEYHLGNLQASSEAYEEAINLEPGL 372

Query: 92  VPILLDRAAINLEMGNTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLR 139
           +   ++ + I  +    + A     + +DE  ++ E L  R  +Y+++
Sbjct: 373 METYVNLSIIYFDQNRFEEAIDVLKEGIDELPEDAE-LYYRLVVYLIK 419



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 21/94 (22%), Positives = 40/94 (42%)

Query: 175 KFKEALEILNKMITATPEDATLYIARADVEREMKHEDLALVDLEEAIRLNPSSADAYLLR 234
           + +E LE+L  +   +P +  + +A ++          A+  LE+ + +    A+ Y   
Sbjct: 82  ELEEGLEVLENINNLSPNNEEIVLALSNGLLLNGSVKEAIQILEDFLPMAEDKAEIYYSL 141

Query: 235 GNIYLTQKKKALAKMDFEKAISLGIPPADLHEQL 268
           GN Y  +     A   ++ A+ L I   D   QL
Sbjct: 142 GNFYRAENNTEKAIFHYKNAVKLKINHEDALFQL 175