Pairwise Alignments

Query, 312 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 305 a.a., integrase protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  447 bits (1151), Expect = e-130
 Identities = 221/303 (72%), Positives = 253/303 (83%)

Query: 9   KKVADGLRAEGNFGTAHVYRSTLNIVTTFHGSRYLDFHQVNPEWLKDFEVYLRSRGSSWN 68
           K+VA+ LR  GNFGTAHVYRS+ N +  + G     F +V PEWLK FE++LR +G SWN
Sbjct: 2   KQVAEELRMGGNFGTAHVYRSSTNAIIAYCGEGDFSFDEVTPEWLKGFEIHLRGKGCSWN 61

Query: 69  TVSTYLRVLRAVYNRAVDLRKAEYIPHLFRSVYTGTRADRKRALEDEDMRKVFSRLSKSS 128
           TVSTYLR  RAVYNRAV+ R   Y PHLFRSVYTGTRAD KRAL DEDM+KVF+RL  SS
Sbjct: 62  TVSTYLRTFRAVYNRAVNSRMVVYTPHLFRSVYTGTRADHKRALCDEDMKKVFTRLPSSS 121

Query: 129 TIPSDLRRTKELFILMFLLRGLPFVDLAYLRKSDLRGNVITYRRRKTGRSLSVTLTPESM 188
            IP  +RR +++F+LMFLLRGLPFVDLAYLRKSDLR NVITYRRRKTGR LSVTLTPE++
Sbjct: 122 AIPLAVRRAQDMFVLMFLLRGLPFVDLAYLRKSDLRDNVITYRRRKTGRPLSVTLTPEAL 181

Query: 189 LLLEKHISRDLSSPYLFPILHSIEGSQEAYREYQLALRSFNQHLELLGQWLGLESKLSSY 248
            LL+K+++RD  SPYLF +L S EG++EAYREYQLALRSFNQ L LLG+ LGL  KLSSY
Sbjct: 182 ELLKKYMNRDSHSPYLFSLLKSGEGTKEAYREYQLALRSFNQQLTLLGEVLGLNDKLSSY 241

Query: 249 TARHTWATTAYYCEIHPGIISEAMGHSSITVTETYLKPFRNRKIDEANNRIVDFVKRSAG 308
           TARHTWATTAYYCEIHPGIISEAMGHSSI VTETYLKPFRN+KIDEANN+I+DFVK S  
Sbjct: 242 TARHTWATTAYYCEIHPGIISEAMGHSSIKVTETYLKPFRNKKIDEANNQIIDFVKHSIA 301

Query: 309 GII 311
           G++
Sbjct: 302 GVV 304