Pairwise Alignments

Query, 312 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 397 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  139 bits (350), Expect = 1e-37
 Identities = 87/304 (28%), Positives = 160/304 (52%), Gaps = 19/304 (6%)

Query: 5   ISFFKKVADGLRAEGNFGTAHVYRSTLNIVTTFHGSRY-----LDFHQVNPEWLKDFEVY 59
           IS+ KK+       G  G A  Y ST   +  + G +      +   ++N  ++  +E Y
Sbjct: 108 ISYKKKM-------GKDGIAAAYHSTYISLKKYIGMKSARKSDIRMEEINFSFVVGYEDY 160

Query: 60  LRSRGSSWNTVSTYLRVLRAVYNRAVDLRKAEYIPHLFRSVYTGTRADRKRALEDEDMRK 119
           L ++G + NT++ YLR  R +YN ++         + F  + T      KRA+  +DM+K
Sbjct: 161 LNAQGLARNTINYYLRNFRTIYNSSIRDGFKPKSENPFTYIQTKPCKTIKRAINKDDMKK 220

Query: 120 VFSRLSKSSTIPSDLRRTKELFILMFLLRGLPFVDLAYLRKSDLRGNVITYRRRKTGRSL 179
           + S +     + S +   +++++  F  +G+ FVD+ +L+K ++R  +++YRR K+ + +
Sbjct: 221 LSSLILP---VHSGMDIARDMYLFSFYAQGMAFVDIVFLKKKNIRDGILSYRRHKSQQLI 277

Query: 180 SVTLTPESMLLLEKHISRDLSSPYLFPILHSIEGSQEAYREYQLALRSFNQHLELLGQWL 239
            + +TP+   L++K+ +    S Y+FPI+ +   S   Y +Y+LAL   N++L+ +   L
Sbjct: 278 HIVITPQMQGLIDKYAN---DSEYVFPIIDT-SLSTSIYDQYRLALGRVNRYLKKITFRL 333

Query: 240 GLESKLSSYTARHTWATTAYYCEIHPGIISEAMGHSSITVTETYLKPFRNRKIDEANNRI 299
            +  +L++YTARHTWAT A        IIS  +GH+S  +T  YLK F    +   N  +
Sbjct: 334 NINVRLTTYTARHTWATLARESGAPISIISAGLGHTSEEMTRVYLKEFDQETLARVNRIV 393

Query: 300 VDFV 303
            + +
Sbjct: 394 TNLL 397