Pairwise Alignments

Query, 312 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 332 a.a., putative integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 10/225 (4%)

Query: 6   SFFKKVADGLRAEGNFGTAHVYRSTLNIVTTFHGSRYLDFHQVNPEWLKDFEVYLRSRGS 65
           S+F++    L   G+ GTA  Y +TL+ +          F  ++   +  +   L   G 
Sbjct: 111 SYFRERIRVLFDTGHEGTAKAYEATLHSMQKHLCKTDFPFAHLSSRLVIKYRDTLLEAGV 170

Query: 66  SWNTVSTYLRVLRAVYNRAVDLRKAEYIPHLFRSVYTGTRADRKRALEDEDMRKVFSRLS 125
             NT+  YL  ++AVY R   L      P  F ++   +    K++L  + ++ + + LS
Sbjct: 171 GKNTIGFYLHNMKAVYRRGC-LELNLVFPSPFCNIRIRSEKTVKQSLPMKQVKSL-ANLS 228

Query: 126 KSSTIPSDLRRTKELFILMFLLRGLPFVDLAYLRKSDLRGNVITYRRRKTGRSLSVTLTP 185
            S   P  L R  ++F+     RG+ FVD+A+L+KSD+   VI YRR+KTG+ L + +  
Sbjct: 229 LSVGTPECLAR--DVFMFSIYTRGMSFVDIAFLKKSDIFPGVIRYRRQKTGQLLEIGINR 286

Query: 186 ESMLLLEKHISRDLSSPYLFPILHSIE----GSQEAYREYQLALR 226
           +   LLE++   D S  YLFP++   E    G ++AY   + AL+
Sbjct: 287 QIQNLLERY--GDTSGDYLFPLVDESETPYSGYKKAYNRMRYALK 329