Pairwise Alignments

Query, 312 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 305 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  457 bits (1175), Expect = e-133
 Identities = 226/303 (74%), Positives = 256/303 (84%)

Query: 9   KKVADGLRAEGNFGTAHVYRSTLNIVTTFHGSRYLDFHQVNPEWLKDFEVYLRSRGSSWN 68
           K+VA GL+ EGNFGTAHVYRS+LN +  + G     FH+V PEWLK FE++LR RG SWN
Sbjct: 2   KQVAKGLQMEGNFGTAHVYRSSLNAIIAYRGKGDFTFHEVTPEWLKGFEIHLRGRGCSWN 61

Query: 69  TVSTYLRVLRAVYNRAVDLRKAEYIPHLFRSVYTGTRADRKRALEDEDMRKVFSRLSKSS 128
           TVSTYLR  RAVYNRAVD R A Y+PHLFRSVYTGTRADRKRAL DEDM+KVF++L  S 
Sbjct: 62  TVSTYLRTFRAVYNRAVDCRGAVYVPHLFRSVYTGTRADRKRALCDEDMQKVFAKLPSSP 121

Query: 129 TIPSDLRRTKELFILMFLLRGLPFVDLAYLRKSDLRGNVITYRRRKTGRSLSVTLTPESM 188
            +   +RRT+ELF+LMFLLRGLPFVDLAYLRKSDL  NVITYRRRKTGR LSVTLT E+M
Sbjct: 122 AVTPAMRRTQELFVLMFLLRGLPFVDLAYLRKSDLHDNVITYRRRKTGRPLSVTLTREAM 181

Query: 189 LLLEKHISRDLSSPYLFPILHSIEGSQEAYREYQLALRSFNQHLELLGQWLGLESKLSSY 248
           +LL+++++RD SSPYLF +L S EG++EAYREYQLALRSFNQ L LLGQ LGL  +LSSY
Sbjct: 182 VLLKRYMNRDSSSPYLFSLLESREGTKEAYREYQLALRSFNQQLLLLGQLLGLGDRLSSY 241

Query: 249 TARHTWATTAYYCEIHPGIISEAMGHSSITVTETYLKPFRNRKIDEANNRIVDFVKRSAG 308
           TARHTWATTAYYCEIHPGIISEAMGHSSITVTETYLKPFRN+KIDEAN  + DFVKR   
Sbjct: 242 TARHTWATTAYYCEIHPGIISEAMGHSSITVTETYLKPFRNKKIDEANQLVTDFVKRIVT 301

Query: 309 GII 311
           G+I
Sbjct: 302 GLI 304