Pairwise Alignments

Query, 312 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 336 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  463 bits (1192), Expect = e-135
 Identities = 222/306 (72%), Positives = 265/306 (86%)

Query: 1   MGNLISFFKKVADGLRAEGNFGTAHVYRSTLNIVTTFHGSRYLDFHQVNPEWLKDFEVYL 60
           M  +++F K+VA GL+  GNFGTAHVYRS+LN +  + G     F++V PEW+K FE++L
Sbjct: 25  MLKVVAFMKQVAKGLQMGGNFGTAHVYRSSLNAIIAYRGKGDFTFNEVTPEWIKGFEIHL 84

Query: 61  RSRGSSWNTVSTYLRVLRAVYNRAVDLRKAEYIPHLFRSVYTGTRADRKRALEDEDMRKV 120
           R RG SWNTVSTYLR  RAVYNRAVD R A Y+PHLFRSVYTGTRADRKRAL+ ED++KV
Sbjct: 85  RGRGCSWNTVSTYLRTFRAVYNRAVDCRGAVYVPHLFRSVYTGTRADRKRALDTEDIQKV 144

Query: 121 FSRLSKSSTIPSDLRRTKELFILMFLLRGLPFVDLAYLRKSDLRGNVITYRRRKTGRSLS 180
           F++L +SS + SD+RRT+ELF+LMFLLRGLPFVDLAYLRKSDL  NVITYRRRKTGR LS
Sbjct: 145 FTKLPQSSAVTSDMRRTQELFVLMFLLRGLPFVDLAYLRKSDLHDNVITYRRRKTGRPLS 204

Query: 181 VTLTPESMLLLEKHISRDLSSPYLFPILHSIEGSQEAYREYQLALRSFNQHLELLGQWLG 240
           VTLTPE+M +L+++++RD SSPYLFP+L+S EG++EAY EYQLALR+FN+ L LLG+ LG
Sbjct: 205 VTLTPEAMAILKRYMNRDTSSPYLFPLLNSREGTKEAYHEYQLALRNFNRQLMLLGEMLG 264

Query: 241 LESKLSSYTARHTWATTAYYCEIHPGIISEAMGHSSITVTETYLKPFRNRKIDEANNRIV 300
           L  KLSSYTARHTWATTAYYCEIHPG+ISEAMGHSSITVTETYLKPFRN+KIDEAN ++V
Sbjct: 265 LGDKLSSYTARHTWATTAYYCEIHPGVISEAMGHSSITVTETYLKPFRNKKIDEANKKVV 324

Query: 301 DFVKRS 306
           DF+KRS
Sbjct: 325 DFIKRS 330