Pairwise Alignments

Query, 312 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 308 a.a., putative integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  116 bits (290), Expect = 8e-31
 Identities = 63/167 (37%), Positives = 103/167 (61%), Gaps = 4/167 (2%)

Query: 15  LRAEGNFGTAHVYRSTLNIVTTFHGSRYLDFHQVNPEWLKDFEVYLRSRGSSWNTVSTYL 74
           L+  G   T+  Y + L   ++F     + F +++ + L ++E YL++RG+S NT+S Y+
Sbjct: 122 LKRLGKIRTSETYTAALKSFSSFMKGSDILFGELSSDLLMEYEAYLKNRGNSPNTISFYM 181

Query: 75  RVLRAVYNRAVDLRKAEYIPHLFRSVYTGTRADRKRALEDEDMRKVFSRLSKSSTIPSDL 134
           R+L+AVYNRAV+        +LF+SVYTG     KRA+   D+R++  RL  S  +   L
Sbjct: 182 RILKAVYNRAVE-NGLTGQRNLFKSVYTGVEKTLKRAIHLNDIRRI-KRLDLS--LKPHL 237

Query: 135 RRTKELFILMFLLRGLPFVDLAYLRKSDLRGNVITYRRRKTGRSLSV 181
              +++F+  F  RG+ FVD+AYL+K D+   ++TYRR+KTG+ L +
Sbjct: 238 DFARDMFLFCFYTRGMSFVDMAYLKKGDIANGILTYRRKKTGQQLFI 284