Pairwise Alignments

Query, 312 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 329 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  140 bits (353), Expect = 4e-38
 Identities = 91/301 (30%), Positives = 165/301 (54%), Gaps = 11/301 (3%)

Query: 7   FFKKVADGLRAEGNFGTAHVYRSTLNIVTTF-HGSRYLDFHQVNPEWLKDFEVYLRSRGS 65
           F++ +      E   G   +Y+S+ N + TF  G+  + F  +NP WL ++E +LRS+G+
Sbjct: 33  FYQDLIKQYANESKCGNRLIYKSSYNSLYTFTKGNLDIPFSAINPSWLCNYEKWLRSKGN 92

Query: 66  SWNTVSTYLRVLRAVYNRAVDLRKAEYIPHLFRSVYTGTR--ADRKRALEDEDMRKVFSR 123
              T+S  LR LR+ YN+A++ + A    + F     G    +  KRA+   D+ K+ + 
Sbjct: 93  KETTMSLMLRTLRSTYNKAIENKYARKSDYPFNEYKIGKFDVSTEKRAIAKADIMKLTAD 152

Query: 124 LSKSSTIPSDLRRTKELFILMFLLRGLPFVDLAYLR-KSDLRGNVITYRRRKTGRSLSVT 182
           +S        ++ +K++F+  +L  G+ F D+A L  K+ + G  + Y R+KTG+ + + 
Sbjct: 153 ISSVGK-RQYVQLSKDIFMFSYLCGGINFTDIANLTSKNIVDGKRLHYIRQKTGKLIKLG 211

Query: 183 LTPESMLLLEKHISRDLSSPYLFPILHSIEGSQEAYREYQLA---LRSFNQHLELLGQWL 239
           L+  ++ ++E++     S  YLFPIL+ +E  + A ++       L   N +L+L+    
Sbjct: 212 LSDAALRIIERYAPD--SHGYLFPILN-VEVHKTALQKQNRIHKILSKVNSNLKLIATQS 268

Query: 240 GLESKLSSYTARHTWATTAYYCEIHPGIISEAMGHSSITVTETYLKPFRNRKIDEANNRI 299
           GL+  L++Y ARH++AT      ++  +ISEA+GHS +  T+ YL  F N +ID+A   +
Sbjct: 269 GLDINLTTYVARHSFATVLKKSGVNIALISEALGHSDLATTQIYLDSFDNEQIDDAMKNL 328

Query: 300 V 300
           +
Sbjct: 329 L 329