Pairwise Alignments

Query, 312 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 229 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  136 bits (343), Expect = 4e-37
 Identities = 87/222 (39%), Positives = 124/222 (55%), Gaps = 10/222 (4%)

Query: 89  KAEYIPHLFRSVYTGTRADRKRALEDEDMRKVFSRLSKSSTIPSDLRRTKELFILMFLLR 148
           +A Y+  LF  VYTG    +K+AL   ++ ++     KS      LRRT+ +  LMF   
Sbjct: 5   RAPYVHRLFHDVYTGVDICQKKALPVGELNRLLYEDPKSER----LRRTQAIAALMFQFC 60

Query: 149 GLPFVDLAYLRKSDLRGNVITYRRRKTGRSLSVTLTPESMLLLEKHISRDLSSP----YL 204
           G+ F DLA+L KS L  N+I Y R KT   +SV +   +  ++ +  +   S P    YL
Sbjct: 61  GMSFADLAHLEKSSLERNIIRYNRIKTKTPMSVEVLDTAQDIISRLRNCQPSHPDCPDYL 120

Query: 205 FPILHSIEGSQE--AYREYQLALRSFNQHLELLGQWLGLESKLSSYTARHTWATTAYYCE 262
           F IL   +  ++  AYREYQ ALR FN  L+ L + L L S ++SYT RH+WATTA Y  
Sbjct: 121 FSILLGDKKREDESAYREYQSALRRFNNRLKRLAKALRLTSPVTSYTIRHSWATTAKYRG 180

Query: 263 IHPGIISEAMGHSSITVTETYLKPFRNRKIDEANNRIVDFVK 304
           +   +ISE++GH SI  T+ YLK F  ++  E N   + +VK
Sbjct: 181 VPIEMISESLGHKSIKTTQIYLKGFGLQERTEVNRMNLSYVK 222