Pairwise Alignments

Query, 312 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 321 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  200 bits (508), Expect = 4e-56
 Identities = 124/296 (41%), Positives = 170/296 (57%), Gaps = 10/296 (3%)

Query: 15  LRAEGNFGTAHVYRSTLNIVTTFHGSRYLDFHQVNPEWLKDFEVYLRSRGSSWNTVSTYL 74
           LR EG + TAHVY + L     F G+  + F QV  E L+ +  YL  RG   NTVSTY+
Sbjct: 18  LRKEGRYSTAHVYENALLSFRGFCGTPTVSFGQVTREHLRCYGQYLYERGLKLNTVSTYM 77

Query: 75  RVLRAVYNRAVDLRKAEYIPHLFRSVYTGTRADRKRALEDEDMRKVFSRLSKSSTIPSDL 134
           R+LR++YNR V+  +A Y+  LF  VYTG    +K+AL   ++ K+     KS      L
Sbjct: 78  RMLRSIYNRGVESGRAPYVHRLFHGVYTGVDVRQKKALPATELHKLLYGDPKSDI----L 133

Query: 135 RRTKELFILMFLLRGLPFVDLAYLRKSDLRGNVITYRRRKTGRSLSVTL--TPESML--L 190
           RRT+ +  LMF   G+ F DLA+L KS L  NV+ Y R KT   +SV +  T + M+  L
Sbjct: 134 RRTQAIAALMFQFCGMSFADLAHLEKSSLDRNVLHYNRVKTKTPMSVEILDTAKDMIYQL 193

Query: 191 LEKHISRDLSSPYLFPILHSIE--GSQEAYREYQLALRSFNQHLELLGQWLGLESKLSSY 248
             +  +      YLF IL+  +    + AYREYQ ALR+FN HL  L + L L S ++SY
Sbjct: 194 QNRKPALQDCPDYLFSILNGNKKRKDESAYREYQSALRNFNNHLRGLAKALHLTSPVTSY 253

Query: 249 TARHTWATTAYYCEIHPGIISEAMGHSSITVTETYLKPFRNRKIDEANNRIVDFVK 304
           T RH+WATTA Y  +   +ISE++GH SI  T+ YLK F  ++  E N   + +VK
Sbjct: 254 TIRHSWATTAKYRGVPIEMISESLGHKSIKTTQIYLKGFALKERTEVNRMNLSYVK 309