Pairwise Alignments

Query, 315 a.a., integrase protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 402 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  159 bits (402), Expect = 1e-43
 Identities = 99/290 (34%), Positives = 153/290 (52%), Gaps = 9/290 (3%)

Query: 15  LRESGNYGTAHIYRSSLSAILAFHGSDKLPFRKVSQEFLKSFESYLRGRNCSWNTVSTYM 74
           L+  G   T+  Y ++L +   F    +  F + + + L  +E+YL+GR  + NT+S YM
Sbjct: 122 LKRLGKIRTSETYTAALRSFSGFMNDPEALFDQFNADLLAEYEAYLKGRGNTLNTISFYM 181

Query: 75  RTLRAVYNRAVDRHLAPYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQLCQDNKE 134
           R L+AVYNRAV+  L     H F+ VYTG     KRAL   D+ R+ K L   L  +   
Sbjct: 182 RILKAVYNRAVEDGLTEQ-RHPFKSVYTGVEKTIKRALSLNDIRRI-KGLDLSLMPN--- 236

Query: 135 LQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPEAMKLIKR 194
           L  TR +F   F  RG+ F+D+AYL+K D+    ++YRRRKTG+ L +       +++ +
Sbjct: 237 LDYTRDMFLFSFYTRGMSFIDMAYLRKKDLQNGTLSYRRRKTGQRLFIKWERCMQEILDK 296

Query: 195 YMNTDPASPYLFSLITSGEGTEAAYKEYQLALRNFNYQLMILKQVLGLTSEVSSYTARHT 254
           Y+  +  + YL  +IT  +  +   K+Y   L   N+ L  + + L L   ++ Y  RH+
Sbjct: 297 YLVNE--TEYLLPIITKRD--DDYRKQYANELHRVNHLLKKIGKQLDLPIPLTMYVGRHS 352

Query: 255 WATMAYYCEVHPGVISEAMGHSSITVTETYLKPFKNKKIDEANVAVISSL 304
           WA++A    V   VISE MGH S   T+ YL       +D+AN  ++  L
Sbjct: 353 WASIAKSRNVPISVISEGMGHDSENTTQIYLASLDTTVVDKANKKILDLL 402