Pairwise Alignments

Query, 315 a.a., integrase protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 316 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  202 bits (515), Expect = 7e-57
 Identities = 120/298 (40%), Positives = 174/298 (58%), Gaps = 11/298 (3%)

Query: 15  LRESGNYGTAHIYRSSLSAILAFHGSDKLPFRKVSQEFLKSFESYLRGRNCSWNTVSTYM 74
           LRE G Y TAH+Y+++L +   F G   + FR+V++E L+ +E +L       NT+STYM
Sbjct: 17  LREEGRYSTAHVYQNALLSFSKFCGVHSVSFRQVTRERLRCYEQHLYECGLKPNTISTYM 76

Query: 75  RTLRAVYNRAVDRHLAPYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQLCQDNKE 134
           R LR++YNR V+   APYV   F  VYTG    +KRAL    + RL+ E P+     +  
Sbjct: 77  RMLRSIYNRGVEAGSAPYVHRLFHEVYTGVDVRQKRALPVVALRRLLYEDPQ-----SDR 131

Query: 135 LQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPEAMKLIKR 194
           L+RT+ +  LMF   G+ F DL++L+K  +D NV+ Y R KT   ++V ++  A +++ +
Sbjct: 132 LRRTQAIAALMFQFCGMSFADLSHLEKSALDSNVLRYNRVKTKTPMSVEVLDSAQEMLDQ 191

Query: 195 YMNTDPASP----YLFSLITSGE--GTEAAYKEYQLALRNFNYQLMILKQVLGLTSEVSS 248
             N     P    YLF ++   +    E AY+EYQ ALR FNY L  L + L L   V+S
Sbjct: 192 LRNRQSPRPGCPDYLFGILHGDKKRKDERAYREYQSALRRFNYCLKSLAKRLRLNFPVTS 251

Query: 249 YTARHTWATMAYYCEVHPGVISEAMGHSSITVTETYLKPFKNKKIDEANVAVISSLKK 306
           YT RH+WAT A Y  V   +ISE++GH SI  T+ YLK F+ K+  E N   +S +K+
Sbjct: 252 YTLRHSWATTAKYRGVPIEMISESLGHKSIKTTQIYLKGFELKERTEVNRMNLSYVKR 309