Pairwise Alignments

Query, 315 a.a., integrase protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 305 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  414 bits (1063), Expect = e-120
 Identities = 204/299 (68%), Positives = 244/299 (81%), Gaps = 1/299 (0%)

Query: 8   MKEVADGLRESGNYGTAHIYRSSLSAILAFHGSDKLPFRKVSQEFLKSFESYLRGRNCSW 67
           MK+VA GL+  GN+GTAH+YRSSL+AI+A+ G     F +V+ E+LK FE +LRGR CSW
Sbjct: 1   MKQVAKGLQMEGNFGTAHVYRSSLNAIIAYRGKGDFTFHEVTPEWLKGFEIHLRGRGCSW 60

Query: 68  NTVSTYMRTLRAVYNRAVDRHLAPYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQ 127
           NTVSTY+RT RAVYNRAVD   A YVPH FR VYTGTRADRKRALD EDM+++  +LP Q
Sbjct: 61  NTVSTYLRTFRAVYNRAVDCRGAVYVPHLFRSVYTGTRADRKRALDTEDMQKVFTKLP-Q 119

Query: 128 LCQDNKELQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPE 187
                 +++RT+ LF LMFLLRG+PFVDLAYL+K D+  NV+TYRRRKTGR L+VTL PE
Sbjct: 120 SSVVTSDMRRTQELFVLMFLLRGLPFVDLAYLRKSDLHDNVITYRRRKTGRPLSVTLTPE 179

Query: 188 AMKLIKRYMNTDPASPYLFSLITSGEGTEAAYKEYQLALRNFNYQLMILKQVLGLTSEVS 247
           AM ++KRYMN D +SPYLF L+ S EGT+ AY EYQLALRNFN QLM+L ++LGL  ++S
Sbjct: 180 AMAILKRYMNRDSSSPYLFPLLNSREGTKEAYHEYQLALRNFNRQLMLLGEMLGLGDKLS 239

Query: 248 SYTARHTWATMAYYCEVHPGVISEAMGHSSITVTETYLKPFKNKKIDEANVAVISSLKK 306
           SYTARHTWAT AYYCE+HPGVISEAMGHSSITVTETYLKPF+NKKIDEAN  V+  +K+
Sbjct: 240 SYTARHTWATTAYYCEIHPGVISEAMGHSSITVTETYLKPFRNKKIDEANKKVVDFIKR 298