Pairwise Alignments

Query, 315 a.a., integrase protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 305 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  404 bits (1039), Expect = e-117
 Identities = 201/300 (67%), Positives = 241/300 (80%), Gaps = 1/300 (0%)

Query: 8   MKEVADGLRESGNYGTAHIYRSSLSAILAFHGSDKLPFRKVSQEFLKSFESYLRGRNCSW 67
           MK+VA GL+  GN+GTAH+YRSSL+AI+A+ G     F +V+ E+LK FE +LRGR CSW
Sbjct: 1   MKQVAKGLQMEGNFGTAHVYRSSLNAIIAYRGKGDFTFHEVTPEWLKGFEIHLRGRGCSW 60

Query: 68  NTVSTYMRTLRAVYNRAVDRHLAPYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQ 127
           NTVSTY+RT RAVYNRAVD   A YVPH FR VYTGTRADRKRAL  EDM+++  +LP  
Sbjct: 61  NTVSTYLRTFRAVYNRAVDCRGAVYVPHLFRSVYTGTRADRKRALCDEDMQKVFAKLPSS 120

Query: 128 LCQDNKELQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPE 187
                  ++RT+ LF LMFLLRG+PFVDLAYL+K D+  NV+TYRRRKTGR L+VTL  E
Sbjct: 121 PAV-TPAMRRTQELFVLMFLLRGLPFVDLAYLRKSDLHDNVITYRRRKTGRPLSVTLTRE 179

Query: 188 AMKLIKRYMNTDPASPYLFSLITSGEGTEAAYKEYQLALRNFNYQLMILKQVLGLTSEVS 247
           AM L+KRYMN D +SPYLFSL+ S EGT+ AY+EYQLALR+FN QL++L Q+LGL   +S
Sbjct: 180 AMVLLKRYMNRDSSSPYLFSLLESREGTKEAYREYQLALRSFNQQLLLLGQLLGLGDRLS 239

Query: 248 SYTARHTWATMAYYCEVHPGVISEAMGHSSITVTETYLKPFKNKKIDEANVAVISSLKKV 307
           SYTARHTWAT AYYCE+HPG+ISEAMGHSSITVTETYLKPF+NKKIDEAN  V   +K++
Sbjct: 240 SYTARHTWATTAYYCEIHPGIISEAMGHSSITVTETYLKPFRNKKIDEANQLVTDFVKRI 299