Pairwise Alignments

Query, 315 a.a., integrase protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 336 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  416 bits (1070), Expect = e-121
 Identities = 204/306 (66%), Positives = 249/306 (81%), Gaps = 1/306 (0%)

Query: 1   MGNLISFMKEVADGLRESGNYGTAHIYRSSLSAILAFHGSDKLPFRKVSQEFLKSFESYL 60
           M  +++FMK+VA GL+  GN+GTAH+YRSSL+AI+A+ G     F +V+ E++K FE +L
Sbjct: 25  MLKVVAFMKQVAKGLQMGGNFGTAHVYRSSLNAIIAYRGKGDFTFNEVTPEWIKGFEIHL 84

Query: 61  RGRNCSWNTVSTYMRTLRAVYNRAVDRHLAPYVPHHFRYVYTGTRADRKRALDKEDMERL 120
           RGR CSWNTVSTY+RT RAVYNRAVD   A YVPH FR VYTGTRADRKRALD ED++++
Sbjct: 85  RGRGCSWNTVSTYLRTFRAVYNRAVDCRGAVYVPHLFRSVYTGTRADRKRALDTEDIQKV 144

Query: 121 MKELPKQLCQDNKELQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRLL 180
             +LP Q      +++RT+ LF LMFLLRG+PFVDLAYL+K D+  NV+TYRRRKTGR L
Sbjct: 145 FTKLP-QSSAVTSDMRRTQELFVLMFLLRGLPFVDLAYLRKSDLHDNVITYRRRKTGRPL 203

Query: 181 TVTLVPEAMKLIKRYMNTDPASPYLFSLITSGEGTEAAYKEYQLALRNFNYQLMILKQVL 240
           +VTL PEAM ++KRYMN D +SPYLF L+ S EGT+ AY EYQLALRNFN QLM+L ++L
Sbjct: 204 SVTLTPEAMAILKRYMNRDTSSPYLFPLLNSREGTKEAYHEYQLALRNFNRQLMLLGEML 263

Query: 241 GLTSEVSSYTARHTWATMAYYCEVHPGVISEAMGHSSITVTETYLKPFKNKKIDEANVAV 300
           GL  ++SSYTARHTWAT AYYCE+HPGVISEAMGHSSITVTETYLKPF+NKKIDEAN  V
Sbjct: 264 GLGDKLSSYTARHTWATTAYYCEIHPGVISEAMGHSSITVTETYLKPFRNKKIDEANKKV 323

Query: 301 ISSLKK 306
           +  +K+
Sbjct: 324 VDFIKR 329