Pairwise Alignments

Query, 315 a.a., integrase protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 413 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  109 bits (273), Expect = 1e-28
 Identities = 91/298 (30%), Positives = 156/298 (52%), Gaps = 28/298 (9%)

Query: 8   MKEVADGLRESGNYGTAHIYRSSLSAILAFHGSDKLPFRKVSQEFLKSFESYLRGRNCSW 67
           MKE+ D  + S    T   YRS+L ++  F G++ +P  +++ E+LK  E +      S+
Sbjct: 116 MKELEDNEQAS----TYLNYRSALKSLECFGGTN-IPLDRITVEWLKHCERFWISNGKSY 170

Query: 68  NTVSTYMRTLRAVYNRAVDRHLAPYVPHHF---RYVYTGTRADRKRALDKEDMERLMKEL 124
           ++VS Y RTL+ + NRAV   +       F   +Y        RK AL   +++R+M   
Sbjct: 171 SSVSIYFRTLKCILNRAVRDGILKESSFPFGKNKYEIPEGHG-RKLALTLPEIKRVMS-- 227

Query: 125 PKQLCQDN-KELQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRL---- 179
                QD+  EL+  R L+F  +L  GI F+DL +L+  +I    + + R KT R     
Sbjct: 228 ----FQDSTNELEEFRDLWFFSYLCNGINFMDLLFLQYSNIVDGEICFIRSKTSRTTKHS 283

Query: 180 --LTVTLVPEAMKLIKRYMNTDPASPYLFSLITSGEGTEAAYKEYQLALR---NFNYQLM 234
             +  T+ PE   +I ++ N +  SP  + +    +G E A+++ +L  R     N +L 
Sbjct: 284 KEIRATITPEMWDIIHKWGNPN-ISPQTY-IFKYAKGNEDAFEKIKLVRRIVTKCNRKLK 341

Query: 235 ILKQVLGLTSEVSSYTARHTWATMAYYCEVHPGVISEAMGHSSITVTETYLKPFKNKK 292
            + Q  G+ +++++YTARH++AT+          ISE++GHS++TVTE YL  F+ ++
Sbjct: 342 KIAQGTGI-AQLTTYTARHSFATVLKRGGAKTSYISESLGHSNLTVTENYLACFEKEE 398