Pairwise Alignments

Query, 315 a.a., integrase protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 229 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  149 bits (375), Expect = 8e-41
 Identities = 91/222 (40%), Positives = 131/222 (59%), Gaps = 11/222 (4%)

Query: 90  APYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQLCQDNKELQRTRGLFFLMFLLR 149
           APYV   F  VYTG    +K+AL   ++ RL+ E PK     ++ L+RT+ +  LMF   
Sbjct: 6   APYVHRLFHDVYTGVDICQKKALPVGELNRLLYEDPK-----SERLRRTQAIAALMFQFC 60

Query: 150 GIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPEAMKLIKRYMNTDPASP----YL 205
           G+ F DLA+L+K  ++ N++ Y R KT   ++V ++  A  +I R  N  P+ P    YL
Sbjct: 61  GMSFADLAHLEKSSLERNIIRYNRIKTKTPMSVEVLDTAQDIISRLRNCQPSHPDCPDYL 120

Query: 206 FSLITSGEGTE--AAYKEYQLALRNFNYQLMILKQVLGLTSEVSSYTARHTWATMAYYCE 263
           FS++   +  E  +AY+EYQ ALR FN +L  L + L LTS V+SYT RH+WAT A Y  
Sbjct: 121 FSILLGDKKREDESAYREYQSALRRFNNRLKRLAKALRLTSPVTSYTIRHSWATTAKYRG 180

Query: 264 VHPGVISEAMGHSSITVTETYLKPFKNKKIDEANVAVISSLK 305
           V   +ISE++GH SI  T+ YLK F  ++  E N   +S +K
Sbjct: 181 VPIEMISESLGHKSIKTTQIYLKGFGLQERTEVNRMNLSYVK 222