Pairwise Alignments

Query, 350 a.a., periplasmic linker protein, putative multidrug resistance protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 360 a.a., putative membrane fusion protein precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 31/302 (10%)

Query: 47  SGIVEAVEYVKLAFRVSGQIISLPVIEGEKVKKGQLIAAIDPRDIALQYAATKSAYETAS 106
           +G++   E V L+F  SG++I +   EG  VKKGQL+A ++ R +  Q     S  + A 
Sbjct: 69  TGVLLPDEEVDLSFETSGKVIEINFEEGTPVKKGQLLAKVNDRQLQAQLQRLVSQLKLAE 128

Query: 107 AQVERNKRLLSRQAISVQEYEISLSNYQKAKSEYELSSNNMRDTKLTAPFDGSIEKRLVE 166
            +V R   LL R A+S + YE   ++     ++ E+   N+  T+L APFDG I  R + 
Sbjct: 129 DRVFRQDALLKRDAVSKEAYEQVKTDLATLNADIEIVKANIALTELRAPFDGIIGLRQIS 188

Query: 167 NYQRVNSGEGIVQLVNTQNLRIKFTIPDAYLYLLRAKDPRFLVEFDTFKGHVFKARLEEY 226
                +    + +L     L+++F++P+ Y   ++             KG     R+E  
Sbjct: 189 VGSYASPTTIVAKLTKITPLKVEFSVPERYASQIK-------------KGTNLNFRIEGK 235

Query: 227 LDISTEGTGIPVSITIDDPSFD----RDLY-----AVKPGFTCSIRFTADVGPLVQDSWT 277
           LD +       V  TI DP+      R LY     A+ PG   SI+   +  P    +  
Sbjct: 236 LD-AFSAKVYAVESTI-DPNLHQFTARALYPNTNRALLPGRYTSIQLKKEEIP----NAI 289

Query: 278 IIPLSAVFGESDGNNMYVWVVEDNKVHKRKIVVNAPTGEAQVLVSEGLKPGEQIVIAGVY 337
            IP  A+  E   + ++++  +  K    ++     T +A+V +  GL+ G+ I+ +G  
Sbjct: 290 AIPTEAIVPEMGKDKVFLY--KSGKAEPVEVTTGIRT-DAEVQIVRGLQVGDTILTSGTL 346

Query: 338 QL 339
           QL
Sbjct: 347 QL 348