Pairwise Alignments

Query, 391 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 432 a.a., Miniconductance mechanosensitive channel YbdG from Pseudomonas sp. RS175

 Score =  263 bits (672), Expect = 7e-75
 Identities = 133/374 (35%), Positives = 229/374 (61%), Gaps = 21/374 (5%)

Query: 35  LMIAIAVGVDYLCQAILVGGMRQYTRRKPHLWNTLLMKRKVFHNLIHTIPAILVYALLPM 94
           L++ IA+ +  + + +++ G +   R+    W   L + KVFH L  T P++++   L +
Sbjct: 31  LLLVIALILGRVARYVILHGAKLLGRQPALNWVNDLRQNKVFHRLAQTTPSLIIQFGLHL 90

Query: 95  AFMRGKELLVISQKACAIYIIFSLLLAINGILLMIMDIYDGKETMKNRPMKGFIQVLQVL 154
                K  LV        + I  +LLAI+ +L  ++D+Y   E  + R +KG++Q+ +++
Sbjct: 91  VPGLSKTSLVFLGNVALSFTILFMLLAISALLSALLDVYARTEHARTRSIKGYVQLTKMV 150

Query: 155 LFFIGGIVIISILVNKSPASLFAGLGASAAILMLVFKDSILGFVAGIQLSANDMVRPGDW 214
           L+  G I+I++ L+++SP  L +GLGA +A+++LV+KD++L FVA +QL++NDM+R GDW
Sbjct: 151 LYVFGAIIIVATLIDRSPLLLLSGLGAMSAVILLVYKDTLLSFVASVQLTSNDMLRVGDW 210

Query: 215 ITLPSGAANGTVQEITLNTVKIQNFDNTISTVPPYTLVSSPFQNWRGMKDSGGRRVMKNI 274
           I +P   A+G V +ITL+TVK+QNFD TI ++P + L+S  F+NWRGM+ SGGRR+ +++
Sbjct: 211 IEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWRLMSESFKNWRGMQQSGGRRIKRSL 270

Query: 275 TLDLTTLQFCTPEMLDRYRKEIPLMADY-----------QPEEGVVP---------TNSQ 314
            +D + ++F   +  +R+  ++ L+ DY              +G V          TN  
Sbjct: 271 FIDASGVRFINDDE-ERHLTQVRLLTDYITRKQAELKAWNEAQGNVAAMSANRRRMTNLG 329

Query: 315 VYRVYIERYLCSLPVVNQDLDLIISQKEATMYGVPIQVYFFSRNKVWKEYERIQSDIFDH 374
            +R Y   YL S P +  ++  ++ Q + T +G+P+++Y F+   VW +YERIQ DIFD+
Sbjct: 330 TFRAYALAYLKSHPEIQPNMTCMVRQLQTTAHGIPLEIYCFTGTTVWADYERIQGDIFDY 389

Query: 375 LLAMVPKFDLKVYQ 388
           LLA++P+F L +YQ
Sbjct: 390 LLAVMPEFGLNLYQ 403