Pairwise Alignments

Query, 391 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 415 a.a., Miniconductance mechanosensitive channel YbdG from Escherichia fergusonii Becca

 Score =  246 bits (628), Expect = 9e-70
 Identities = 128/342 (37%), Positives = 208/342 (60%), Gaps = 18/342 (5%)

Query: 65  LWNTLLMKRKVFHNLIHTIPAILVYALLPMAFMRGKELLVISQKACAIYIIFSLLLAING 124
           LW  ++ + K+FH L  T+  I+V         +G E   I      ++I+   LL++  
Sbjct: 58  LWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFS 117

Query: 125 ILLMIMDIYDGKETMKNRPMKGFIQVLQVLLFFIGGIVIISILVNKSPASLFAGLGASAA 184
           +L +I+++          P+KG  Q ++++   + GI++IS+L+ +SPA L +GLGA AA
Sbjct: 118 LLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAA 177

Query: 185 ILMLVFKDSILGFVAGIQLSANDMVRPGDWITLPSGAANGTVQEITLNTVKIQNFDNTIS 244
           +LMLVFKD ILG VAGIQLSANDM++ GDW+ +P   A+G V +I L TVK++N+DNTI+
Sbjct: 178 VLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTIT 237

Query: 245 TVPPYTLVSSPFQNWRGMKDSGGRRVMKNITLDLTTLQFCTPEMLDRYRKEIPL------ 298
           T+P ++LVS  F+NW GM  SGGRR+ ++I++D+T+++F   + + R  K   L      
Sbjct: 238 TIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRFLDEDEMQRLNKAHLLKPYLTS 297

Query: 299 ----MADYQPEEGVVP--------TNSQVYRVYIERYLCSLPVVNQDLDLIISQKEATMY 346
               + ++  ++G           TN   +R Y+  YL + P + +D+ L++ Q      
Sbjct: 298 RHQEINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDN 357

Query: 347 GVPIQVYFFSRNKVWKEYERIQSDIFDHLLAMVPKFDLKVYQ 388
           G+P+++Y F+   VW EYE IQ+DIFDH+ A+V +F L+++Q
Sbjct: 358 GLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEEFGLRLHQ 399