Pairwise Alignments

Query, 362 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 363 a.a., major outer membrane protein OmpA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  643 bits (1659), Expect = 0.0
 Identities = 314/359 (87%), Positives = 329/359 (91%)

Query: 4   KKILVAVYALSTTIAFAQEQRIKEESKTIFKPHWFIQAQIGAAHTVGEGEFTDLISPAAA 63
           +K+L+ + A+S     AQEQRIKE  K  FKPHWFIQAQIGAAHTVGE +FTDLISPAAA
Sbjct: 5   RKLLIGIMAISVLPISAQEQRIKEPEKISFKPHWFIQAQIGAAHTVGEAKFTDLISPAAA 64

Query: 64  LNVGYKFAPAFGARVGVSGWQAKGGWVNPRQNYQYKYLQGNVDIMADLSTLFCGFHPKRV 123
           LNVGYKFAPAFGARVGVSGWQAKGGWVNP+Q YQYKYLQGNVDIMADLSTLFCGF+PKRV
Sbjct: 65  LNVGYKFAPAFGARVGVSGWQAKGGWVNPQQTYQYKYLQGNVDIMADLSTLFCGFNPKRV 124

Query: 124 FNGYLFGGVGLNRGFDNDEANALDTRTYEMEYLWQEGKFLVAGRFGLGCDFRLNDRLSIN 183
           FNGYLF G GLNRGFDNDEANALDTRTYEMEYLWQEGKFLVAGRFGLGCD RLNDRLSIN
Sbjct: 125 FNGYLFAGAGLNRGFDNDEANALDTRTYEMEYLWQEGKFLVAGRFGLGCDLRLNDRLSIN 184

Query: 184 IEANANALSDKFNSKKAGNCDWQLNALVGVSIRLGKSYTKTAPVYYEPEPVVTEQPKPAP 243
           IEANANALSDKFNSKKAGNCDWQLNALVGVSIRLGKSYTKTAPVYYEPEPVVTEQPKPAP
Sbjct: 185 IEANANALSDKFNSKKAGNCDWQLNALVGVSIRLGKSYTKTAPVYYEPEPVVTEQPKPAP 244

Query: 244 VVEQPQPKKEVVIEPLKQNIFFALNSAKIQDDQQAKISSLVEYLEKHSAAKVSVTGYADK 303
           VVEQPQPKKEVVIEPLKQNIFFA+NSAKIQDDQQAKI+SLVEYLEK++ AKVSVTGYADK
Sbjct: 245 VVEQPQPKKEVVIEPLKQNIFFAINSAKIQDDQQAKIASLVEYLEKNATAKVSVTGYADK 304

Query: 304 ETGNPNINMTLSEKRAKNVIEMLKAKGVVADRIVIGYKGDTVQPYQKPEENRVCICIAE 362
            TGN  IN  LSEKRA NV+E LKAKG+ ADRI + YKGDTVQPY  PEENRV ICIAE
Sbjct: 305 GTGNARINSKLSEKRANNVVEALKAKGIAADRITVAYKGDTVQPYNTPEENRVSICIAE 363