Pairwise Alignments

Query, 336 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 316 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  206 bits (523), Expect = 8e-58
 Identities = 120/297 (40%), Positives = 172/297 (57%), Gaps = 10/297 (3%)

Query: 39  LQMGGNFGTAHVYRSSLNAIIAYRGKGDFTFNEVTPEWIKGFEIHLRGRGCSWNTVSTYL 98
           L+  G + TAHVY+++L +   + G    +F +VT E ++ +E HL   G   NT+STY+
Sbjct: 17  LREEGRYSTAHVYQNALLSFSKFCGVHSVSFRQVTRERLRCYEQHLYECGLKPNTISTYM 76

Query: 99  RTFRAVYNRAVDCRGAVYVPHLFRSVYTGTRADRKRALDTEDIQKVFTKLPQSSAVTSDM 158
           R  R++YNR V+   A YV  LF  VYTG    +KRAL    ++++  + PQS      +
Sbjct: 77  RMLRSIYNRGVEAGSAPYVHRLFHEVYTGVDVRQKRALPVVALRRLLYEDPQSDR----L 132

Query: 159 RRTQELFVLMFLLRGLPFVDLAYLRKSDLHDNVITYRRRKTGRPLSVTLTPEAMAILKRY 218
           RRTQ +  LMF   G+ F DL++L KS L  NV+ Y R KT  P+SV +   A  +L + 
Sbjct: 133 RRTQAIAALMFQFCGMSFADLSHLEKSALDSNVLRYNRVKTKTPMSVEVLDSAQEMLDQL 192

Query: 219 MNRDTSSP----YLFPLLNSREGTKE--AYHEYQLALRNFNRQLMLLGEMLGLGDKLSSY 272
            NR +  P    YLF +L+  +  K+  AY EYQ ALR FN  L  L + L L   ++SY
Sbjct: 193 RNRQSPRPGCPDYLFGILHGDKKRKDERAYREYQSALRRFNYCLKSLAKRLRLNFPVTSY 252

Query: 273 TARHTWATTAYYCEIHPGVISEAMGHSSITVTETYLKPFRNKKIDEANKKVVDFIKR 329
           T RH+WATTA Y  +   +ISE++GH SI  T+ YLK F  K+  E N+  + ++KR
Sbjct: 253 TLRHSWATTAKYRGVPIEMISESLGHKSIKTTQIYLKGFELKERTEVNRMNLSYVKR 309