Pairwise Alignments

Query, 363 a.a., major outer membrane protein OmpA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 364 a.a., major outer membrane protein OmpA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  578 bits (1489), Expect = e-169
 Identities = 278/361 (77%), Positives = 313/361 (86%), Gaps = 2/361 (0%)

Query: 5   RKLLIGIMAI--SVLPISAQEQRIKEPEKISFKPHWFIQAQIGAAHTVGEAKFTDLISPA 62
           +KL + + A+  S   ISAQEQRIKE  K  FKPHWF+Q Q+GAAHT+GEAKF+DLISPA
Sbjct: 4   KKLWMPVFALLLSSTVISAQEQRIKEEGKTEFKPHWFMQVQVGAAHTLGEAKFSDLISPA 63

Query: 63  AALNVGYKFAPAFGARVGVSGWQAKGGWVNPQQTYQYKYLQGNVDIMADLSTLFCGFNPK 122
           AA+NVGY+FAPA+ ARVGVSGWQAKGGWV+PQQ YQYKYLQGN+DI++DLSTLFCGFNPK
Sbjct: 64  AAINVGYQFAPAWRARVGVSGWQAKGGWVSPQQDYQYKYLQGNIDIVSDLSTLFCGFNPK 123

Query: 123 RVFNGYLFAGAGLNRGFDNDEANALDTRTYEMEYLWQEGKFLVAGRFGLGCDLRLNDRLS 182
           RVFNGY+F G GLNRGFDNDEANALDTRTYEMEYLW++GKFL+AGR GLGC+LRLNDRLS
Sbjct: 124 RVFNGYVFLGGGLNRGFDNDEANALDTRTYEMEYLWRDGKFLIAGRMGLGCNLRLNDRLS 183

Query: 183 INIEANANALSDKFNSKKAGNCDWQLNALVGVSIRLGKSYTKTAPVYYEPEPVVTEQPKP 242
           INIE NAN LSDKFNSKKAGN DWQ NAL+G++I+ GK YT+T PVYYE EPVV EQPKP
Sbjct: 184 INIEGNANVLSDKFNSKKAGNADWQFNALIGLNIKFGKGYTETKPVYYEAEPVVVEQPKP 243

Query: 243 APVVEQPQPKKEVVIEPLKQNIFFAINSAKIQDDQQAKIASLVEYLEKNATAKVSVTGYA 302
            PVVEQPQPKKEVV++P+KQ+IFFA+NSAKIQDDQ++KI  LVEYL+ N  AKV VTGYA
Sbjct: 244 VPVVEQPQPKKEVVVQPMKQDIFFALNSAKIQDDQKSKIDMLVEYLQNNPAAKVKVTGYA 303

Query: 303 DKGTGNARINSKLSEKRANNVVEALKAKGIAADRITVAYKGDTVQPYNTPEENRVSICIA 362
           D  TGN +IN  LSEKRA NV +ALKAKGI  DRI V  KGDTVQPY  PEENRVSICIA
Sbjct: 304 DVNTGNPKINKSLSEKRAGNVADALKAKGITTDRIMVDSKGDTVQPYKAPEENRVSICIA 363

Query: 363 E 363
           E
Sbjct: 364 E 364