Pairwise Alignments

Query, 363 a.a., major outer membrane protein OmpA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 362 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  643 bits (1659), Expect = 0.0
 Identities = 314/359 (87%), Positives = 329/359 (91%)

Query: 5   RKLLIGIMAISVLPISAQEQRIKEPEKISFKPHWFIQAQIGAAHTVGEAKFTDLISPAAA 64
           +K+L+ + A+S     AQEQRIKE  K  FKPHWFIQAQIGAAHTVGE +FTDLISPAAA
Sbjct: 4   KKILVAVYALSTTIAFAQEQRIKEESKTIFKPHWFIQAQIGAAHTVGEGEFTDLISPAAA 63

Query: 65  LNVGYKFAPAFGARVGVSGWQAKGGWVNPQQTYQYKYLQGNVDIMADLSTLFCGFNPKRV 124
           LNVGYKFAPAFGARVGVSGWQAKGGWVNP+Q YQYKYLQGNVDIMADLSTLFCGF+PKRV
Sbjct: 64  LNVGYKFAPAFGARVGVSGWQAKGGWVNPRQNYQYKYLQGNVDIMADLSTLFCGFHPKRV 123

Query: 125 FNGYLFAGAGLNRGFDNDEANALDTRTYEMEYLWQEGKFLVAGRFGLGCDLRLNDRLSIN 184
           FNGYLF G GLNRGFDNDEANALDTRTYEMEYLWQEGKFLVAGRFGLGCD RLNDRLSIN
Sbjct: 124 FNGYLFGGVGLNRGFDNDEANALDTRTYEMEYLWQEGKFLVAGRFGLGCDFRLNDRLSIN 183

Query: 185 IEANANALSDKFNSKKAGNCDWQLNALVGVSIRLGKSYTKTAPVYYEPEPVVTEQPKPAP 244
           IEANANALSDKFNSKKAGNCDWQLNALVGVSIRLGKSYTKTAPVYYEPEPVVTEQPKPAP
Sbjct: 184 IEANANALSDKFNSKKAGNCDWQLNALVGVSIRLGKSYTKTAPVYYEPEPVVTEQPKPAP 243

Query: 245 VVEQPQPKKEVVIEPLKQNIFFAINSAKIQDDQQAKIASLVEYLEKNATAKVSVTGYADK 304
           VVEQPQPKKEVVIEPLKQNIFFA+NSAKIQDDQQAKI+SLVEYLEK++ AKVSVTGYADK
Sbjct: 244 VVEQPQPKKEVVIEPLKQNIFFALNSAKIQDDQQAKISSLVEYLEKHSAAKVSVTGYADK 303

Query: 305 GTGNARINSKLSEKRANNVVEALKAKGIAADRITVAYKGDTVQPYNTPEENRVSICIAE 363
            TGN  IN  LSEKRA NV+E LKAKG+ ADRI + YKGDTVQPY  PEENRV ICIAE
Sbjct: 304 ETGNPNINMTLSEKRAKNVIEMLKAKGVVADRIVIGYKGDTVQPYQKPEENRVCICIAE 362