Pairwise Alignments

Query, 524 a.a., Ribonuclease G (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1111 a.a., ribonuclease E from Pectobacterium carotovorum WPP14

 Score =  265 bits (676), Expect = 9e-75
 Identities = 158/486 (32%), Positives = 268/486 (55%), Gaps = 34/486 (6%)

Query: 1   MTSEIVIDVQPKEVSIALLEDKSLVELQSEGRNISFSVGNMYLGRIKKLMPGLNACFVDV 60
           M   ++   Q +E+ +AL++ + L +L  E         N+Y G+I ++ P L A FVD 
Sbjct: 1   MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY 60

Query: 61  GYEKDAFLHYLDLGPQF--NSLEKFVKQTLSDKKKLNSISKATLLPDLDKDGTVANTLKV 118
           G E+  FL   ++  ++  N+     +  + D                         L+ 
Sbjct: 61  GAERHGFLPLKEIAREYFPNNYSSHGRPNIKD------------------------VLRE 96

Query: 119 GQEVVVQIVKEPISTKGPRLTSEISFAGRYLVLIPFNDKVSVSQKIKSSEERARLKQLLM 178
           GQEV+VQ+ KE    KG  LT+ IS AG YLVL+P N +     +    ++R  LK+ L 
Sbjct: 97  GQEVIVQVDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALG 156

Query: 179 SIK-PKNFGVIVRTVAEGKRVAELDGELKVLIKHWEDAMAKVQKATKYPTLIYEETSRAV 237
           S++ P   G+IVRT   GK    L  +L   +KHW DA+ K  +    P LI++E++  V
Sbjct: 157 SLQLPDGMGLIVRTAGVGKSAEALQWDLAFRLKHW-DAIKKAAEGRPAPFLIHQESNVIV 215

Query: 238 GLLRDLFNPSFENIHVNDEAVYNEIKDYVTLIA-PDRANIVKLYKGQLPIYDNFGITKQI 296
              RD   P    I +++  + +  K++++ +  PD ++ +KLY G++P++ ++ I  QI
Sbjct: 216 RAFRDYLRPDIGEILIDNPKILDLAKEHISALGRPDFSSKIKLYSGEIPLFSHYQIESQI 275

Query: 297 KSSFGKTVSYKSGAYLIIEHTEALHVVDVNSGNRTKNANGQEGNALEVNLGAADELARQL 356
           +S+F + V   SG  ++I+ TEAL  +D+NS   T+  + +E  A   NL AADE+ARQL
Sbjct: 276 ESAFQREVRLPSGGSIVIDTTEALTAIDINSARATRGGDIEE-TAFNTNLEAADEIARQL 334

Query: 357 RLRDMGGIIVVDFIDMNEAENRQKLYERMCANMQKDRARHNILPLSKFGLMQITRQRVRP 416
           RLRD+GG+IV+DFIDM    +++++  R+  ++++DRAR  I  +S+FGL++++RQR+ P
Sbjct: 335 RLRDLGGLIVIDFIDMTPVRHQREVENRLRDSVRQDRARIQIGRISRFGLLEMSRQRLSP 394

Query: 417 AMDVNTTEICPTCFGKGTIKSSILFTDTLESKIDYLVNKLKVKKFSLHVHPYVAAFINQG 476
           ++  ++  +CP C G GTI+ +    ++L   I  L+ +  +K+ +  VH  V   I   
Sbjct: 395 SLGESSHHVCPRCSGTGTIRDN----ESLSLSILRLIEEEALKENTKEVHAIVPVQIASY 450

Query: 477 LVSLRR 482
           L++ +R
Sbjct: 451 LLNEKR 456