Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 648 a.a., MacB family efflux pump subunit from Dickeya dadantii 3937

 Score =  199 bits (507), Expect = 9e-56
 Identities = 102/221 (46%), Positives = 146/221 (66%)

Query: 1   MIKTEKLSMLFTTEEVQTKALNEVTLHVEQGEFVAIMGPSGCGKSTLLNILGTLDSPTSG 60
           ++   +L   F   E +   L  + L +  GE VAI+G SG GKSTL+NILG LD PT G
Sbjct: 5   LLALRRLHRSFINGEQRVDVLKNINLTIHAGEMVAIVGASGSGKSTLMNILGCLDKPTQG 64

Query: 61  SYFFEGKQVDKMNENQLTALRKNNLGFIFQSFNLIDELTVYENVELPLVYMGIKTAQRKE 120
            Y   G     +N++QL ALR+ + GFIFQ ++L+++L V +NVE+P VY G    +R++
Sbjct: 65  DYQVAGVSTLTLNDDQLAALRREHFGFIFQRYHLLNDLDVGDNVEMPAVYAGQARHERRQ 124

Query: 121 KVNKVLEKVNLLHRANHYPQQLSGGQQQRVAIARAVVTDCKLLLADEPTGNLDSVNGVEV 180
           +   +L ++ L  R    P QLSGGQQQRV+IARA++   +++LADEPTG LDS +G EV
Sbjct: 125 RAAALLARLGLAGRLRDSPSQLSGGQQQRVSIARALINGGQVILADEPTGALDSASGEEV 184

Query: 181 MELLSELNRQGTTIIIVTHSQRDATYAHRIIRLLDGQIVSE 221
           + +L EL++QG TI++VTH  R A  A RII + DG+IV++
Sbjct: 185 LSILHELHQQGHTIVLVTHDMRIARMAGRIIEIHDGEIVAD 225