Pairwise Alignments

Query, 243 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 240 a.a., DNA-binding response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  157 bits (398), Expect = 1e-43
 Identities = 83/229 (36%), Positives = 137/229 (59%), Gaps = 3/229 (1%)

Query: 5   MNCIIVDDEPLAREAMKLLIEEAECLQLVGSFNSAATASDFMEQHVVDLVFLDIQMPGIT 64
           M CII+DDEPLA+E ++ L  +   L+++    +A     ++E    DLVF+DIQMP ++
Sbjct: 1   MKCIIIDDEPLAQEVIEKLARKVPFLEVLQKAGNAIEGLKYIEALKPDLVFMDIQMPTMS 60

Query: 65  GIEFARTISK-RTLVIFTTAYTEYALDSYEVDAIDYLIKPVEAERFQKAVEKAQSYHSLL 123
           GIE  + ++  +  +I TTA  +YAL+ +E+D   YL+KP+  ERF KAV K     +  
Sbjct: 61  GIELIKILNHVKPQIILTTASPDYALEGFELDVAGYLLKPISFERFLKAVNKVHHLINST 120

Query: 124 LQEEKEAIETIVAAEYFFVKAERRYFKVNFSDILFVEGLKDYVILQLGEQRIITRMSLKA 183
            Q + +  E      +F+ K   +   + F D+L V+G+KDYV + L +++IIT +++K 
Sbjct: 121 NQVKYQENEGQAFNTHFWAKVNGKLLHIKFEDVLLVKGMKDYVQIYLKDRKIITYLTMKR 180

Query: 184 VFDLLPKDSFLRVNKSYIVNTAHIDSFDNN--DIFIKSYEIAIGNSYRD 230
           + ++LP   F RV++S+IV T+ I   D N  +  +   EI IG++YR+
Sbjct: 181 ILEILPPHEFTRVSRSFIVRTSSIQGIDGNVLETSVADEEIIIGSTYRE 229