Pairwise Alignments

Query, 1042 a.a., TonB-dependent receptor for vancomycin (SusC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1001 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  414 bits (1063), Expect = e-119
 Identities = 316/1080 (29%), Positives = 519/1080 (48%), Gaps = 139/1080 (12%)

Query: 9    VAFLLLSAGNVVYAEAQQEKRVTGTVTSEGEPLPGVSVQVKGASSGTITDIDGNYSIEAP 68
            + F +L+    + A AQQ       + ++ EPL GVSVQ KG ++G ITD+DGN+++   
Sbjct: 15   ILFAILAVFFSLSASAQQFTASGQVLDAQKEPLIGVSVQEKGTTNGAITDLDGNFTLTVQ 74

Query: 69   ANGTIVFRFVGLRTVEQAVNNRNVINVTMESESKELEEVMVVAYATAKKYSFTGAASTMK 128
            +N T++F +VG ++ EQ  + +  + VT++ +++ LEEV+V+ Y + K+   T A ST+ 
Sbjct: 75   SNATLIFSYVGYKSQEQKASRQ--MKVTLQEDNEVLEEVVVIGYGSVKRKDVTTAISTVS 132

Query: 129  AGEIEKLQTSSVSRVLEGTVSGVQASASSGQPGTDAEIRIRGIGSINASSAPLYVVDGVP 188
              +++     S  + ++G  +G+     SG PG +  IR+RG  S+N S+ PLYVVDGVP
Sbjct: 133  TKDLDVRPIVSAGQAIQGKAAGISVIQPSGTPGGEMSIRVRGTTSMNGSNDPLYVVDGVP 192

Query: 189  FDGSVNSINPDDIASMTVLKDAASAALYGSRGANGVIIITTKQGQQDSKATVKVKATLGG 248
             D ++  ++P+DI SM +LKDA+SA++YGSR ANGVI+ITTK G    KA V + A  G 
Sbjct: 193  VD-NIKFLSPNDIESMQILKDASSASIYGSRAANGVILITTKAGAT-GKAKVSLTAQFG- 249

Query: 249  SSRAVRDYDRVNTNQYFELYWEALRNQYAKSSDYTPATAATQASKDLVTKLMGGGPNPYG 308
             ++     + +N  QY EL                      Q    LV+ L  G P+   
Sbjct: 250  LNKVADKVESLNAAQYKEL----------------------QDEIGLVS-LPDGLPD--- 283

Query: 309  TQYPQPVGTDGKLAAGARPLWNSDWSDAMEQQALRTELNLSVSGGGKANQYFFSAGYLND 368
                                  +DW D   +        ++VS G +  +Y+ SAGYL++
Sbjct: 284  ---------------------RTDWFDETYKTGKMQNYQVAVSNGNEKMKYYLSAGYLDE 322

Query: 369  KGIALESGYQRFNLRSNVTSEMTSWLKGSINLSFAHSMQN--YPVSSDSKTSNVITAGRT 426
            KGI   S Y+R+N R N+ +++ SWL  S N+S++    N    + + +    V+ A   
Sbjct: 323  KGILDISYYKRYNFRVNLENQIRSWLTVSANISYSDYTSNGGGAMGTGANRGGVVLAVIN 382

Query: 427  MPGFYPICEMNTDGSYKLDDNGDRIYDFGSY-RPSGSMANWNLPATLPLDKSERMKDEFS 485
             P + PI +      Y      +  Y  G+   P  +MA     A    DK  R+    S
Sbjct: 383  TPTYAPIWDALNPNQYY-----NNFYGVGNITNPLENMAR----AKNNKDKENRLL--AS 431

Query: 486  GRTYLEATIIEGLKFKTSFNFDLINYNTLDYTNPKIGPAL---ENGGGSSRLNSRTFSWT 542
            G   L  T++  LKFK++   D  N     + +P I  A    + G  S   N  T   T
Sbjct: 432  GNVLL--TLLPELKFKSTLTLDRRNAVNTTFLDP-ISTAWGRNQYGEASDNRNMNTV-LT 487

Query: 543  WNNIASYDKTIGDHHFNVLAGMEAYSYRYDELTASRTKMAQPDMPELVVGSQL------T 596
            ++N+ +Y+K    H   V+AG       Y     + +      +  L   +++      T
Sbjct: 488  FDNVFTYNKNFKRHGLEVMAGSSWTDSDYSNSWINGSHYRNDLIQTLNAANKIAWDNTGT 547

Query: 597  GGSGYRIDYALVGYLTQALYDYQNKYFFSASFRRDGSSRFAPETRWGNFWSLGTSWRIDR 656
            G S     + ++ +  +  Y++ +KY  +A+ R DGSS+  P+ RWG F S   +WR+  
Sbjct: 548  GAS----QWGIMSFFGRVAYNFDSKYLLTANLRADGSSKLHPDHRWGVFPSFSAAWRVSS 603

Query: 657  ESFMASTANWLSALTLKMSYGAQGNDN-LGTY---------------YASKGLYTIVSNL 700
            E FMA    W+    ++  +G  GN + +G Y                A++G  T  +N 
Sbjct: 604  EKFMAD-LTWIDDFKIRGGWGQTGNQSGIGDYAYLQRYNIGRIEWFKVAAEGDTTDYAN- 661

Query: 701  GENALVSDRMATPNLKWETNLNFNVGVDFSLFNNRFSGSFDFFTRRSKDLLYSRPI-APS 759
                +    + T +L WET    N+G+D ++ N R + + D++ +++K++L +  + A +
Sbjct: 662  AVPTISQANLRTSDLTWETTTQTNIGLDLTVLNGRLTFNMDYYYKKTKNMLMNVSLPAGA 721

Query: 760  LGYGSIDENVGALKNTGIEMVLNGTIINQNGWVWKLGMNLTHYKNKVTELPLK------- 812
                SI  N G + N G E+ ++        + W    N++  +NK+T+L L+       
Sbjct: 722  AAATSIARNEGEMTNKGFELTISSKNFRGGAFTWDTDFNISFNRNKLTKLELQKVYYDAK 781

Query: 813  --DMPQSGVNKLQVGRSVYDFYMKEWAGVDPDNGNPLWYMDEKDANDNLTGK-RVTTSDY 869
              D+    V + + GR++  FY     GVDP+ G  L Y D       L+G  +++TSD 
Sbjct: 782  TADVVNDYVVRNEPGRALGGFYGYISDGVDPETGE-LMYRD-------LSGDGKISTSDR 833

Query: 870  ASANYYYVNKSSLPKVYGGFNTSLSWKGFDLSAIFAYSIGGYIYNRDITMILHNGSLEGR 929
                  Y+   +    YG  NT  SWKGF+LS     S G  I+N   + I   G  +G+
Sbjct: 834  T-----YIGDPNPDFTYGLTNT-FSWKGFNLSVFIQGSYGNDIFN--ASRIETEGMYDGK 885

Query: 930  DWSTEILKRWTPENRYTDVPALSTTSNNWNSASTRFLQNNSYMRLKNLTLSYDLPKQWIS 989
            + ST++L RW    + T+VP  +    N    ST F+++ SY+RLK+++LSY+   + + 
Sbjct: 886  NQSTKVLNRWKIPGQITNVPKANFKLLN----STYFIEDGSYLRLKDVSLSYNFKGKLLQ 941

Query: 990  KLALSSVQVFVQGDNLFTIHRNQGLDPEQG-------ITGITYYRYPAMRTISGGINLSF 1042
            K  ++ +Q +    NL T     G+DPE         + GI +  YP  R+   GIN+ F
Sbjct: 942  KWGITRLQPYFTATNLLTWTSYSGMDPEVNQWGNSGTVQGIDWGTYPHSRSYVFGINVEF 1001