Pairwise Alignments

Query, 305 a.a., transcription regulator, AraC family (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 281 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 67.4 bits (163), Expect = 4e-16
 Identities = 55/240 (22%), Positives = 111/240 (46%), Gaps = 33/240 (13%)

Query: 71  YDYQDGTIVCFAPGQITDLEMLPNIQPNAHGILFHPDLIRGTALGQEIKKY--SFFSYET 128
           Y +  G +VC  P Q+  +    N       +LF   +   T   Q I +Y  S   ++ 
Sbjct: 59  YVFSAGDVVCTQPNQVHHIIDTGNADVL---LLFIDGVFIDTPTKQIIAEYVLSPVPFKI 115

Query: 129 NEALHISEEERQTVM---------DCLQKITIELEHSIDKHSRRLICANIGLLLDYCMRF 179
           N+  +    +  +++         DC  K  I+           L CA +G++ D   ++
Sbjct: 116 NDIQYTDLGQLFSMILRRMNGGNPDCKSKAVIQ----------NLSCAIVGIITDNIQKY 165

Query: 180 YERQFDTRNGVNKDIIVRFEHLLNEYFEGDAPQNQGLPSVKYFADKVFLSANYFGDMVRK 239
             +    R  +  +I +  + L +E       + Q   SV Y+A+ + +S  Y  ++V+ 
Sbjct: 166 IGQNHKNRRHI--EITLALKALFSE-------EKQLNRSVSYYAEALHISPVYLNEVVKN 216

Query: 240 QTGKTVSEYIQDKMIELAKEQLMSSNKTMSQIAYEIGFQYPQHLSRMFKRIVGMTPNQFR 299
            TG++VS+YIQ+++I  AK  L+ ++  + +I+ ++G +   + +R+F + VG+ P  +R
Sbjct: 217 VTGESVSKYIQNELILRAKRMLVYTSLNVREISIDLGIEDYAYFTRLFTKAVGVNPTSYR 276