Pairwise Alignments

Query, 386 a.a., diaminopimelate decarboxylase (EC 4.1.1.20) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 415 a.a., diaminopimelate decarboxylase from Pseudomonas simiae WCS417

 Score =  252 bits (644), Expect = 1e-71
 Identities = 148/347 (42%), Positives = 208/347 (59%), Gaps = 10/347 (2%)

Query: 41  SYSVHYAVKANANPKVLTIIRESGMGADCVSGGEIRAAVRAGFPANKIVFAGVGKADWEI 100
           S+ V YAVKAN+N  VL ++   G G D VS GE+   + AG  A KIVF+GVGK   ++
Sbjct: 52  SHLVCYAVKANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDM 111

Query: 101 NLGLEYGIFCFNVESIPELEVINELAAAQNKIANVAFRINPDVGAHTHANITTGLAENKF 160
              LE G+ CFN+ES  ELE +  +AA     A ++ R+NPDV A TH  I+TGL ENKF
Sbjct: 112 RRALEVGVHCFNIESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKF 171

Query: 161 GISMQDMDRVIDVALEMKNVKFIGLHFHIGSQILDMGDFIALCNRVNELQDKLEARRILV 220
           GI++ D + V   A ++ N++ +G+  HIGSQ+  +  F+   +R+  L D+L    I +
Sbjct: 172 GIAIADAEDVYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGECGIYL 231

Query: 221 EHINVGGGLGIDYGHPNRQSVPDFKSYFATYAGQLKLRPYQTLHFELGRAVVGQCGSLIS 280
            HI++GGG+G+ Y     +  P    Y      +++ R   TL FE GR +V   G L++
Sbjct: 232 HHIDLGGGVGVRY---RDEEPPLIADYIKAVRERIEGRDL-TLMFEPGRYIVANAGVLLT 287

Query: 281 KVLYVKQGTKKKFAILDAGMTDLIRPALYQAYHKMENITSE-EPVEAYDVVGPICESSDV 339
           +V Y+K    K FAI+DA M DLIRPALYQA+  +  +T       AYD+VGPICE+ D 
Sbjct: 288 QVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMNVTAVTPRASEARAYDIVGPICETGDF 347

Query: 340 FGKAIDLNKVKRGDLIALRSAGAYGEIMASGYNCRELPKGYTSDELV 386
             K   L  ++ GDL+A+ SAGAYG +M+S YN R    G T++ LV
Sbjct: 348 LAKDRQL-ALEEGDLLAIHSAGAYGFVMSSNYNTR----GRTAEVLV 389