Pairwise Alignments

Query, 386 a.a., diaminopimelate decarboxylase (EC 4.1.1.20) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 415 a.a., diaminopimelate decarboxylase from Pseudomonas putida KT2440

 Score =  255 bits (651), Expect = 2e-72
 Identities = 147/348 (42%), Positives = 208/348 (59%), Gaps = 15/348 (4%)

Query: 37  AKYPSYS---------VHYAVKANANPKVLTIIRESGMGADCVSGGEIRAAVRAGFPANK 87
           A+Y SY+         V +AVKAN+N  VL ++   G G D VSGGE+   + AG  A++
Sbjct: 39  AQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADR 98

Query: 88  IVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKIANVAFRINPDVGAHT 147
           +VF+GVGK   ++   LE G+ CFNVES  ELE +  +AA   K+A V+ R+NPDV A T
Sbjct: 99  VVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGT 158

Query: 148 HANITTGLAENKFGISMQDMDRVIDVALEMKNVKFIGLHFHIGSQILDMGDFIALCNRVN 207
           H  I+TGL ENKFGI++ D + +   A ++ N++ +G+  HIGSQ+  +  F+   +R+ 
Sbjct: 159 HPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLL 218

Query: 208 ELQDKLEARRILVEHINVGGGLGIDYGHPNRQSVPDFKSYFATYAGQLKLRPYQTLHFEL 267
            L D+L    I + H+++GGG+G+ Y       V D+        G+  L     L FE 
Sbjct: 219 VLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPRVADYIKAIRERVGERDL----ALVFEP 274

Query: 268 GRAVVGQCGSLISKVLYVKQGTKKKFAILDAGMTDLIRPALYQAYHKMENITSEE-PVEA 326
           GR +V   G L+++V Y+K    K FAI+DA M DLIRPALYQA+  +  +        A
Sbjct: 275 GRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRA 334

Query: 327 YDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYNCR 374
           YD+VGPICE+ D  GK   LN +  GDL+A+ SAGAYG +M+S YN R
Sbjct: 335 YDLVGPICETGDFLGKDRVLN-LAEGDLLAVESAGAYGFVMSSNYNTR 381