Pairwise Alignments

Query, 190 a.a., putative transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 167 a.a., Transcription antiterminator from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 82.4 bits (202), Expect = 4e-21
 Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 4/161 (2%)

Query: 27  WLVALVRISHEKKTSERLSKMGIENFLPVQQEVHQWSDRRKVVERVLLPMMIFVHVDMYE 86
           W V       EK+ ++RL + G+  +LP+ +EV QWSDR+K V+R L    IFV  D   
Sbjct: 7   WYVMYTAPRAEKRVAQRLEEKGVTAYLPMIEEVRQWSDRKKKVKRPLFNGYIFVRSDKSR 66

Query: 87  QKEVLTLGSISRYMVLRGESTPAVIPDEQMHRFKFMLDYSDEAINMSTTPLSPGTKIKVI 146
             E L +    +++   G+   AV+ D ++   K +++ +  A+ + TT +  G ++K+I
Sbjct: 67  LWEALQVQGAVKFVNFSGDH--AVVRDSEIEAIKRIVE-TGVAVEVETTHIEEGQQVKII 123

Query: 147 KGPLSGLQGELVTVNGKSKVAVRLTML-GCAFVDIPVGCVE 186
            GPL G +GE +    +    +R+  +     V+IPV  +E
Sbjct: 124 GGPLQGFEGECIQKGNQDFFIIRVPSIHQTVMVNIPVKFLE 164