Pairwise Alignments

Query, 190 a.a., putative transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 185 a.a., transcription termination/antitermination factor NusG from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 44.7 bits (104), Expect = 1e-09
 Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)

Query: 26  RWLVALVRISHEKKTSERL----SKMGIENFLPV----QQEVHQWSD-RRKVVERVLLPM 76
           +W V  V    EKK    L    ++  +E+++P      ++V++  + +++V ER   P 
Sbjct: 5   KWYVLRVVAGQEKKAKSYLDNEITRQKLEDYIPEVLIPSEKVYEMRNGKKRVRERNFFPG 64

Query: 77  MIFVHVDMYEQKEVLTLGSISRYMVLRGES------TPAVIPDEQMHRFKFMLDYSDEAI 130
            + V+ D+   +    + SI   +   G +      TP  +   +++R    ++  DE  
Sbjct: 65  YVLVNADLSHGEANHVITSIPGVIGFLGANAGGASKTPEPLRQSEINRILGRVEGIDEFA 124

Query: 131 NMSTTPLSPGTKIKVIKGPLSGLQGELVTV-NGKSKVAVRLTMLG 174
               TP   G  IKV+ GP SG  G +  V   K K+ V + + G
Sbjct: 125 EKLDTPYIVGETIKVMDGPFSGFSGTIEEVFEDKKKLNVMVKIFG 169