Pairwise Alignments

Query, 190 a.a., putative transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 192 a.a., transcription termination/antitermination factor NusG from Bacteroides ovatus ATCC 8483

 Score =  260 bits (665), Expect = 9e-75
 Identities = 127/186 (68%), Positives = 155/186 (83%)

Query: 1   MIFSKKDIQEVLPADVTGRSVAHPKRWLVALVRISHEKKTSERLSKMGIENFLPVQQEVH 60
           MI +K       P+D TG  VAH KRW VALVR+ HEKK +ERL KMGIENF+PVQQE+H
Sbjct: 1   MILTKPKSISAGPSDGTGEGVAHSKRWYVALVRMHHEKKVAERLDKMGIENFVPVQQEIH 60

Query: 61  QWSDRRKVVERVLLPMMIFVHVDMYEQKEVLTLGSISRYMVLRGESTPAVIPDEQMHRFK 120
           QWSDRRKVVE VLLPMM+FVHV+  E+KEVL   ++SRYMV+RGES+PAVIPDEQM RF+
Sbjct: 61  QWSDRRKVVESVLLPMMVFVHVNPKERKEVLGFSTVSRYMVMRGESSPAVIPDEQMARFR 120

Query: 121 FMLDYSDEAINMSTTPLSPGTKIKVIKGPLSGLQGELVTVNGKSKVAVRLTMLGCAFVDI 180
           FMLDYS+EAI M+++PL+ G K++V+KGPL+GL GELV V+GKSK+AVRL MLGCA V++
Sbjct: 121 FMLDYSEEAICMNSSPLARGEKVRVVKGPLTGLVGELVNVDGKSKIAVRLNMLGCACVNM 180

Query: 181 PVGCVE 186
           P+G VE
Sbjct: 181 PIGYVE 186