Pairwise Alignments

Query, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 181 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase from Pseudomonas simiae WCS417

 Score =  187 bits (474), Expect = 1e-52
 Identities = 96/170 (56%), Positives = 119/170 (70%), Gaps = 3/170 (1%)

Query: 1   MEVIKTNIEGVVIIEPRIFKDDRGYFFESFSQREFEEKV-CKTTFVQDNESKSSYGVLRG 59
           M VI+T++  V+IIEP++F D+RG+F+ESF+ R FEE    K  FVQDN S+S  GVLRG
Sbjct: 1   MNVIETSLPDVLIIEPKVFGDERGFFYESFNARAFEEATGLKRQFVQDNHSRSQKGVLRG 60

Query: 60  LHFQKPPFAQSKLVRVIKGAVLDVAVDIRKGSPTFGQYVSVELTGENHRQFFIPRGFAHG 119
           LH+Q     Q KLVRV  G VLDVAVDIR+ SP FGQ+V V L+ +NHRQ ++P GFAHG
Sbjct: 61  LHYQLE-HTQGKLVRVTAGEVLDVAVDIRRSSPNFGQWVGVRLSAQNHRQLWVPEGFAHG 119

Query: 120 FSVLSEEVIFQYKCDNFYSPQSEGAIAWNDPDLNIDWRIPAEKVVLSEKD 169
           F VLSE   F YK  ++Y P +E  I WNDP L IDW + +E   LS KD
Sbjct: 120 FVVLSEHAEFLYKTTDYYQPSAERCILWNDPTLAIDWEL-SEAPQLSAKD 168