Pairwise Alignments

Query, 478 a.a., TPR-domain containing protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 231 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 50.4 bits (119), Expect = 6e-11
 Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 9/147 (6%)

Query: 267 PPEMGYMFLGLTYSNKEAWKEADDYYQRVIDRFIEEGLGNSPLLIDTYTNKAVAASRLGK 326
           P E      G+     E + EA  Y+ RVI++        +P   + +  K VA    GK
Sbjct: 10  PSEQELYDAGIKEMRLEKFNEAITYFDRVIEQ--------NPDHTEAHNAKGVAFFEQGK 61

Query: 327 YEEAHQLCKKAIAIQPDDPAIYLAEGKLYIQENQKKKAVKSFDKALTMEPS-AEMWYMVA 385
           ++EA +  K A+         YL  G  Y+++   K AV +++ A +++P+  +++Y   
Sbjct: 62  WDEAIKHFKVAMEKDSTSYKPYLNLGNAYLEKKAFKDAVINYNMASSLDPNQTDIYYNRG 121

Query: 386 SAYSDAEYLYQAKLCFQEAYRIDPNYA 412
            A    E    A L F  A ++DPN A
Sbjct: 122 LALLGMEAYEDAILDFDNALQVDPNQA 148



 Score = 46.6 bits (109), Expect = 9e-10
 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 11/174 (6%)

Query: 202 YWVGLAKCRFAAEDCEKAIEACDFALAADDKCGEAYAYRGHSYFYLNNSDAAIEDYKKAI 261
           Y  G+ + R   E   +AI   D  +  +    EA+  +G ++F     D AI+ +K A+
Sbjct: 16  YDAGIKEMRL--EKFNEAITYFDRVIEQNPDHTEAHNAKGVAFFEQGKWDEAIKHFKVAM 73

Query: 262 KYKALPPEMGYMFLGLTYSNKEAWKEADDYYQRVIDRFIEEGLGNSPLLIDTYTNKAVAA 321
           + K       Y+ LG  Y  K+A+K+A      VI+  +   L   P   D Y N+ +A 
Sbjct: 74  E-KDSTSYKPYLNLGNAYLEKKAFKDA------VINYNMASSL--DPNQTDIYYNRGLAL 124

Query: 322 SRLGKYEEAHQLCKKAIAIQPDDPAIYLAEGKLYIQENQKKKAVKSFDKALTME 375
             +  YE+A      A+ + P+   ++    K  I  N   +A+ +  +++ ++
Sbjct: 125 LGMEAYEDAILDFDNALQVDPNQALVHFNRAKALIGNNNPLEAINALKRSVAID 178



 Score = 40.0 bits (92), Expect = 8e-08
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 323 RLGKYEEAHQLCKKAIAIQPDDPAIYLAEGKLYIQENQKKKAVKSFDKALTMEPSAEMWY 382
           RL K+ EA     + I   PD    + A+G  + ++ +  +A+K F  A+  + ++   Y
Sbjct: 24  RLEKFNEAITYFDRVIEQNPDHTEAHNAKGVAFFEQGKWDEAIKHFKVAMEKDSTSYKPY 83

Query: 383 M-VASAYSDAEYLYQAKLCFQEAYRIDPNYADI 414
           + + +AY + +    A + +  A  +DPN  DI
Sbjct: 84  LNLGNAYLEKKAFKDAVINYNMASSLDPNQTDI 116



 Score = 23.9 bits (50), Expect = 0.006
 Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 3/102 (2%)

Query: 189 YNQLIDIDPYNASYWVGLAKCRFAAEDCEKAIEACDFALAADDKCGEAYAYRGHSYFYLN 248
           YN    +DP     +          E  E AI   D AL  D      +  R  +    N
Sbjct: 103 YNMASSLDPNQTDIYYNRGLALLGMEAYEDAILDFDNALQVDPNQALVHFNRAKALIGNN 162

Query: 249 NSDAAIEDYKKAIKYKALPPEMGYMFLGLTYSNKEAWKEADD 290
           N   AI   K+++   A+    G  F  L  +   A  E ++
Sbjct: 163 NPLEAINALKRSV---AIDNTNGAAFYLLGVTEMSALSEKEE 201