Pairwise Alignments

Query, 438 a.a., L-fucose/D-arabinose symporter FucP (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 409 a.a., L-fucose:H+ symporter permease from Serratia liquefaciens MT49

 Score =  219 bits (559), Expect = 1e-61
 Identities = 136/418 (32%), Positives = 214/418 (51%), Gaps = 33/418 (7%)

Query: 20  FILITSCFALWGFANDITNPMVKAFSKIFRMSATDGALVQVAFYGGYFAMAFPAAMFIRK 79
           FIL+TS F +WG +  + + + K F +   ++     L+Q A++G YF +A PA  F+ K
Sbjct: 24  FILVTSLFFMWGLSYGLLDVLNKHFQETLHVTKAQSGLLQAAYFGAYFLVALPAGYFMDK 83

Query: 80  FSYKAGVLLGLGLYAFGAFLFFPAKMTGEYYPFLIAYFILTCGLSFLETSCNPYILSMGT 139
             YKAG+L+GL LYA GA LF PA     +  FL A F++ CGL  LET+ NPY   +G 
Sbjct: 84  KGYKAGILVGLCLYALGALLFVPAASANSFAMFLFALFVIACGLGCLETAANPYATVLGD 143

Query: 140 EETATRRLNLAQSFNPMGSLLGMYVAMQFIQAKLHPMGTDERALLNDSEFQAIKESDLAV 199
            + A RRLNL+QSFN +G  +G  +            GT     L  S  Q     D + 
Sbjct: 144 AKGAERRLNLSQSFNGLGQFIGPMIG-----------GT-----LFFSATQGASSGDQSA 187

Query: 200 LIAPYLIIGLVILAMLLLIRFVKMPKNGDQNHKIDFFPTLKRIFTQTRYREGVIAQFFYV 259
           +   Y+ I +++L +  L    ++P   ++    +     + ++    +  GVI QFFYV
Sbjct: 188 VKMTYVAIAVLVLLIAFLFGRTRLPDIREEEQP-EHGEIAQGLWQHKHFVGGVITQFFYV 246

Query: 260 GVQIMCWTFIIQYGTRLFMSPEYGMDEKSAEVLSQQYNIVAMVIFCISRFICTFILRYLN 319
             Q+    F I Y T  +      +  +SA  L      +AM+ F + RF  T+++  + 
Sbjct: 247 AAQVGVGAFFINYATEHWNE----VSNQSASYLLS----IAMICFMVGRFFSTWLMGRVK 298

Query: 320 AGKLLMILAIFGGIFTLGTIFLQ-NIFGLYCLVAVSACMSLMFPTIYGIALKGMGDDAKF 378
              LLMI ++   I   G + L  +   +  L+AV   MS+MFPTI+ + +K MG   K 
Sbjct: 299 PATLLMIYSLI-NIALCGVVMLSLDGVSVVALIAVFFFMSIMFPTIFALGVKNMGKHTKR 357

Query: 379 GAAGLIMAILGGSVLPPLQASIIDMKEIASMPAVNVSFILPLTCFLVIIGYGYRTVKR 436
            ++ +IMAI+GG+++P    ++ D    A      +S++LPL CF V+  YG +  +R
Sbjct: 358 ASSFMIMAIVGGAIMPYFMGALADKYSTA------LSYVLPLLCFGVVFVYGLQQRRR 409