Pairwise Alignments

Query, 300 a.a., AraC-type transcription regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 281 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 10/245 (4%)

Query: 55  IGLCLEGSTRFNISLREFELIPGRMVIALPNQIIEHRQFSSNFRGIFFAVSKSLLESLPK 114
           +G+   G+   +I  +E+    G +V   PNQ+  H    +    +       +    P 
Sbjct: 42  LGVVKSGTCHVSIDFKEYVFSAGDVVCTQPNQV--HHIIDTGNADVLLLFIDGVFIDTPT 99

Query: 115 VGNVLSFFFFLKDYPCFDLNLHEQEMIKEYHAFIRKRLKNKDDRYRREVVMGLMQGFFFE 174
              +  +   L   P    ++   ++ + +   +R+      D   + V+  L       
Sbjct: 100 KQIIAEYV--LSPVPFKINDIQYTDLGQLFSMILRRMNGGNPDCKSKAVIQNLSCAIVGI 157

Query: 175 LCNIFNSYAPDASAVVKSKSRKEYIFERFYESLV-QSYQSERSVKFYADQLCLTPKHLSG 233
           + +    Y          K+R+        ++L  +  Q  RSV +YA+ L ++P +L+ 
Sbjct: 158 ITDNIQKYIGQ-----NHKNRRHIEITLALKALFSEEKQLNRSVSYYAEALHISPVYLNE 212

Query: 234 VVKEVSGKTVGEWIDELVILEAKALLNSSSMNIQEIADRLNFANQSFFGKYFKHYTGMSP 293
           VVK V+G++V ++I   +IL AK +L  +S+N++EI+  L   + ++F + F    G++P
Sbjct: 213 VVKNVTGESVSKYIQNELILRAKRMLVYTSLNVREISIDLGIEDYAYFTRLFTKAVGVNP 272

Query: 294 KEYRK 298
             YRK
Sbjct: 273 TSYRK 277