Pairwise Alignments

Query, 300 a.a., AraC-type transcription regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 281 a.a., transcription regulator, AraC-type (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  106 bits (265), Expect = 5e-28
 Identities = 66/261 (25%), Positives = 130/261 (49%), Gaps = 7/261 (2%)

Query: 41  ISLYNGPS----KLEVVSIGLCLEGSTRFNISLREFELIPGRMVIALPNQIIEHRQFSSN 96
           I+L NG      K+E     LC++G+ +  I+   + ++   ++   PN  +E  +FSS+
Sbjct: 22  INLLNGYKNFHCKIEAGFFILCVKGTIQATINGERYNIVENDLITLPPNYFMEIHEFSSD 81

Query: 97  FRGIFFAVSKSLLESLPKVGNVLSFFFFLKDYPCFDLNLHEQEMIKEYHAFIRKRLKNKD 156
               +   S   +E++  + +       + + P  +L+  +    K ++  +     +  
Sbjct: 82  IHIYYAGFSSQFIENINLMKSTQHLLPIIVENPVINLSPLQACSYKMFYESLILAYASAK 141

Query: 157 DRYRREVVMGLMQGFFFELCNIFNSYAPDASAVVKSKSRKEYIFERFYESLVQSYQSERS 216
               +E+V  ++  F      I   Y   ++  + ++SRK  I++ F + ++++Y     
Sbjct: 142 TLANKEIVKAVLTMFIQGATEI---YKLQSNRYLSTQSRKYEIYQEFLQLVMKNYTVHHG 198

Query: 217 VKFYADQLCLTPKHLSGVVKEVSGKTVGEWIDELVILEAKALLNSSSMNIQEIADRLNFA 276
             FYAD L L+  H    +K+ +G T  E I  +++++AK+ L SS+  ++ IA  L F 
Sbjct: 199 ASFYADHLGLSLPHFCSTIKKAAGNTPLEVIASVILMDAKSRLKSSNEPVKNIALSLGFN 258

Query: 277 NQSFFGKYFKHYTGMSPKEYR 297
           N SFF K+FK +TG++P+EYR
Sbjct: 259 NISFFNKFFKQHTGVTPQEYR 279