Pairwise Alignments

Query, 555 a.a., conserved hypothetical protein, putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 517 a.a., TrkA, Potassium channel-family protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  157 bits (398), Expect = 7e-43
 Identities = 128/525 (24%), Positives = 243/525 (46%), Gaps = 42/525 (8%)

Query: 54  HFGLSVDPQMLNYAESFGLVIFVYSLGLQVGPGFFSSFRKGGVTLNMLALAVVLLGTLLT 113
           HF ++ D      A + G ++F++ +G++ GP FFS F + G    MLAL +V    L+ 
Sbjct: 10  HFSINTD------ALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALLIA 63

Query: 114 VVASYATGVSLPDMVGILCGATTNTPALGAAQQTLKQMGIESS-------TPALGCAVAY 166
           +      G  +    G+L G+ T+TP L  A  TL+  GI S+         +LG A+ Y
Sbjct: 64  LGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGIASTQLSSALDNLSLGYALTY 123

Query: 167 PMGVIGVILAVLLIRKFLVHKEDLEIKEKD---------DANK----TFIAAFQVHNPAI 213
            +G++ +I+    + K  +  +DL+   +          DAN+      I A++V    +
Sbjct: 124 LIGLVSLIVGARYLPK--LQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELV 181

Query: 214 F---NKSIKDIAQMSYPKFVISRLWRDGHVSIPTSDKVLKEGDRLLVITAEKNVLALTVL 270
                K+++++         I R+ R+G ++ P  D VL+ GD + ++        L   
Sbjct: 182 AWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPS 241

Query: 271 FGEQEENTDWNKEDIDWNAIDSELISQRIVVTRPELNGKKLGSLRLRNHYGINISRVYRS 330
           F          KE  D + +D  ++++ IVV      G++L  L+L +H G  ++RV RS
Sbjct: 242 FRN-------GKEVFDRDLLDMRIVTEEIVVKNHNAVGRRLAQLKLTDH-GCFLNRVIRS 293

Query: 331 GVQLLATPELILQLGDRLTVVGEAAAIQNVEKVLGNAVKSLKEPNLVVIFIGIVLGLALG 390
            +++     ++L  GD L V G+A  ++ +   +G      +  +L+      ++GL +G
Sbjct: 294 QIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFIIGLMIG 353

Query: 391 AIPFSIPGISTPVKLGLAGGPIIVGILLGTFGPRIHMITYTTRSANLMLRALGLSMYLAC 450
            I F     S    +G A G +  GI+LG          Y  + A  M++  GL +++A 
Sbjct: 354 MITFQFSNFS--FGIGNAAGLLFAGIMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAG 411

Query: 451 LGLDAGAHFFDTVFRPEGLLWIALGAGLTIIPTVLVGFVAFKIMKIDFGSVSGMLCGSMA 510
           +GL AG+   + +    G + IA G  ++++P V+       +++++   + G + G+  
Sbjct: 412 VGLSAGSGISNGLGAVGGQMLIA-GLVVSLVPVVICFLFGAYVLRMNRALLFGAMMGART 470

Query: 511 NPMALNYANDTIPGDNPSVAYATVYPLCMFLRVIIAQVLLMFLLG 555
              A+   +DT   + P++ YA  Y +   L  +   ++++   G
Sbjct: 471 CAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTLIVIIWPG 515