Pairwise Alignments

Query, 555 a.a., conserved hypothetical protein, putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 564 a.a., putative transport protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  159 bits (403), Expect = 2e-43
 Identities = 146/587 (24%), Positives = 266/587 (45%), Gaps = 59/587 (10%)

Query: 1   MEWLYNLFLEHSALQAVVVLSLISAIGLGLGRVHFWGVSLG-VTFVFFAGILAGHFGLSV 59
           MEW+ N   +H  L   + L+L +  G  LGR      SLG VT V   G+L G   +SV
Sbjct: 1   MEWIINQLRDHPEL--AIFLTLFA--GFWLGRFKIGKFSLGTVTSVLLVGVLVGQLNISV 56

Query: 60  DPQMLNYAESFGLVIFVYSLGLQVGPGFFSSFRKGGVTLNMLALAVVLLGTLLTVVASYA 119
           D  M    ++   ++F++++G +VGP FF   +K G+     A+ + ++  +   + +  
Sbjct: 57  DGPM----KAVFFLLFLFAVGYKVGPQFFRGLKKDGLPQVGFAVLMCIVSLIAPWILAKI 112

Query: 120 TGVSLPDMVGILCGATTNTPALGAAQQTLKQMGIESSTPA-------LGCAVAYPMGVIG 172
            G  + +  G+L G+ T +  +G A  T+ Q+ I  +  A       +  AV Y  G  G
Sbjct: 113 MGYHVGEAAGLLAGSQTISAVIGVASDTINQLSISDAQKATFINAIPVAYAVTYIFGTAG 172

Query: 173 V--ILAVL------LIRKFLVHKEDLEIK----EKDD------ANKTFIAAFQVHNPAIF 214
              ILA L       + K     ++LE K    E D+             A+++ N   F
Sbjct: 173 SAWILASLGPKMLGGLEKVKADCKELEAKMGTSEADEPGFYTALRPVVFRAYKIDN-EWF 231

Query: 215 NKSIKDIAQM------SYPKFVISRLWRDGHVSIPTSDKVLKEGDRLLVITAEKNVLALT 268
            K  K ++++      +  +  + R+ + G +   T D +L+ GD +++    +  +   
Sbjct: 232 GKG-KTVSELENYLVENDKRLFVERVRQKGVIEEVTPDMLLQPGDEVVLSGRREYAI--- 287

Query: 269 VLFGEQEENTDW-NKEDIDWNAIDSELISQRIVVTRPELNGKKLGSLR-LRNHYGINISR 326
              GE+    DW   E ID   +D    +  ++VT     G+K+ ++R L+  +G++I  
Sbjct: 288 ---GEE----DWIGPEVIDAQLLDFPAETLPVMVTHRTFAGEKVSTIRALKFMHGVSIRS 340

Query: 327 VYRSGVQLLATPELILQLGDRLTVVGEAAAIQNVEKVLGNAVKSLKEPNLVVIFIGIVLG 386
           + R+G+ +    + ++  GD L + G    ++   K +G   +   + +++ + +GI+LG
Sbjct: 341 IKRAGINVPVLAQTVIDSGDILELTGTKLEVETAAKQMGYIDRPTNQTDMIFVGLGILLG 400

Query: 387 LALGAIPFSIPGISTPVKLGLAGGPIIVGILLGTFGPRIHMITYTTRSANLMLRALGLSM 446
             +GA+   + GI  P+ L  +GG +I G++ G    +          +  +L  +GL+M
Sbjct: 401 GLVGALAIHLGGI--PISLSTSGGALIAGLVFGWLRSKHPTFGGIPEPSLWVLNNVGLNM 458

Query: 447 YLACLGLDAGAHFFDTVFRPEGLLWIALGAGLTIIPTVLVGFVAFKIMKIDFGSVSGMLC 506
           ++A +G+ AG  F  T F+  G     +GA  T IP +    +   + K       G   
Sbjct: 459 FIAVVGIAAGPSFV-TGFKEVGFSLFIVGALATAIPLLSGLLMGRYLFKFHPALTLGCTA 517

Query: 507 GSMANPMALNYANDTIPGDNPSVAYATVYPLCMFLRVI--IAQVLLM 551
           G+     AL    D +  D P++ Y   Y +   L +I  +A VLLM
Sbjct: 518 GARTTTAALGAIQDALGSDTPALGYTVTYAVGNTLLIIWGVAIVLLM 564