Pairwise Alignments

Query, 380 a.a., cytochrome D ubiquinol oxidase subunit II (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 333 a.a., cytochrome d ubiquinol oxidase subunit II from Paraburkholderia sabiae LMG 24235

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 81/366 (22%), Positives = 147/366 (40%), Gaps = 53/366 (14%)

Query: 9   WWLVVSLLGAILVFLLFVQGGNSLLFCLGKTEEHRKMMVNSTGRKWEFTFTTLVTFGGAF 68
           W  +++L   I V L     G  ++F     E+ R +M+N+    W+   T LV  G   
Sbjct: 7   WAAIIALGLFIYVVLDGFDLGIGIVFPFFPDEKERDLMMNTVAPVWDGNETWLVLGGAGL 66

Query: 69  FASFPLFYSTSFGGAYWLWMIILFSFVLQAVSYEFQSKAGNLLGKKTYQTFLVINGVVGP 128
           FA+FP+ YST     Y   + +L   + + VS+E ++KA      K       I G  G 
Sbjct: 67  FAAFPVVYSTVLSALYLPLVFMLACLIFRGVSFEIRAKANR---TKHLWDLAFIGGSTGA 123

Query: 129 LLLGG-AVATFFTGSDFYINKANMTDTIMPVI--SHWGNGWHGLDALTNIWNVILGLAVF 185
               G A+  F  G              +PV+  S+ G  +  L      ++++ GL + 
Sbjct: 124 AFFQGIALGAFLQG--------------IPVVDGSYAGGAFDWLTP----FSLLTGLGLV 165

Query: 186 FLARVLGSLYFINSIADKELTDKCRRAVLNNTIFFLVFFLVFVIRT-LVSDGFAVNPDTL 244
               +LG  + + +  + +L  +  R V   TI  L F +V  + T L   G A      
Sbjct: 166 VTYALLGCCWLV-AKTEGDLQRRLHRVVWPLTIVLLGFIVVVSLWTPLQEPGIA------ 218

Query: 245 EVYMQPYKYFINFIEMPVVLIIFLIGVVLVLFGIGKTVLKKTFDKGIWFAGIGTVLTVLA 304
                  ++F   I   ++ + FL+ +        +  ++       +   +G VL    
Sbjct: 219 ------QRWFDAGIFWRLLPVPFLVAICTFFM---RRAVRDRHHNTPFMMALGLVLLGYV 269

Query: 305 LLLVAGYNNTAYYPSYTDLQSSLTLANSCSSEFT-LKTMAYVSILVPFVIAYI---FYAW 360
            LLV+ +           + SSLTL  + +   + + T+   ++++P +I Y    ++ +
Sbjct: 270 GLLVSLWPYA--------IPSSLTLWEAAAPRSSQMFTLVGAAVIIPIIIGYTTMGYWVF 321

Query: 361 RSIDRH 366
           R   RH
Sbjct: 322 RGKVRH 327