Pairwise Alignments

Query, 380 a.a., cytochrome D ubiquinol oxidase subunit II (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 379 a.a., cytochrome d ubiquinol oxidase subunit II from Dickeya dianthicola 67-19

 Score =  118 bits (296), Expect = 2e-31
 Identities = 100/397 (25%), Positives = 189/397 (47%), Gaps = 42/397 (10%)

Query: 2   YIFLQQYWWLVVSLLGAILVFLL---FVQGGNSLLFCLGKTEEHRKMMVNSTGRKWEFTF 58
           Y  L+  WWL++ +L  ++ F +   F  G   L+  +G+ +  R++M+NS    W+   
Sbjct: 4   YEVLRFVWWLLIGVL--LIGFAVTDGFDMGVGILVRLMGRNDVERRVMINSIAPHWDGNQ 61

Query: 59  TTLVTFGGAFFASFPLFYSTSFGGAYWLWMIILFSFVLQAVSYEFQSKAGNLLGKKTYQT 118
             L+T GGA FA++P+ Y+ +F G Y   +++L S   + V ++++SK  +   +  +  
Sbjct: 62  VWLITAGGALFAAWPMVYAAAFSGFYIAMILVLASLYFRPVGFDYRSKIEDPRWRNMWDW 121

Query: 119 FLVINGVVGPLLLGGAVATFFTGSDFYIN---KANMTDTIMPVISHWGNGWHGLDALTNI 175
            + I   V P+++G A      G  F+++   +   T     +++ +G     L  + ++
Sbjct: 122 GIFIGSFVPPVVIGVAFGNLLQGVPFHVDEYLRLYYTGNFFQLLNPFGL----LAGVVSL 177

Query: 176 WNVILGLAVFFLARVLGSLYF-INSIADKELTDKCRRAVLNNTIFFLVFFLVFVIRTLVS 234
             ++   A + + R  G L+F +  +A             ++    + F L  V      
Sbjct: 178 SMIVAQGATYLVMRTTGDLHFRVKKVAQ-----------FSSLALTVTFALAGVWVVYGI 226

Query: 235 DGFAV----------NPDTLEVYMQPYKYFINFIEMPVVLIIFLIGVVLVLFGIGKTVLK 284
           DG+AV          NP   EV  Q   + +NF   PV+  + L+GVVL L     T + 
Sbjct: 227 DGYAVTSVINTAGESNPLHKEVVRQAGAWLVNFNHHPVLWAVPLLGVVLPLM----TAVM 282

Query: 285 KTFDKGIWFAGIGTVLTVLALLLVAGYNNTAY-YPSYTDLQSSLTLANSCSSEFTLKTMA 343
              +KG   A + + L++  ++L AG     +  PS T    SLT+ ++ SS  TL+ M 
Sbjct: 283 ARAEKGA-MAFLFSSLSIACVILTAGIAMFPFIMPSVTVPNVSLTIWDATSSLLTLRVMT 341

Query: 344 YVSIL-VPFVIAYIFYAWRSIDRHKITEKEMDEGGHS 379
            V+I+ VP V++Y  + +  +   +IT++ +++  HS
Sbjct: 342 VVAIIFVPIVLSYTIWCYYKM-FGRITKEHVEQNSHS 377